KEGG   Rhincodon typus (whale shark): 109916761
Entry
109916761         CDS       T06055                                 
Symbol
prdm13
Name
(RefSeq) PR domain zinc finger protein 13
  KO
K24645  PR domain zinc finger protein 13 [EC:2.1.1.-]
Organism
rtp  Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rtp03000]
    109916761 (prdm13)
Transcription factors [BR:rtp03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 PRDM
    109916761 (prdm13)
SSDB
Motif
Pfam: PRDM2_PR zf-C2H2 zf-H2C2_2 zf-C2H2_4 SET zf-C2H2_7th_ZNF462 zf-BED Zf-C2H2_ZNF451 zf-C2H2_15 C2CH-3rd_BIRD-IDD
Other DBs
NCBI-GeneID: 109916761
NCBI-ProteinID: XP_020372088
LinkDB
Position
5:complement(43350575..43359237)
AA seq 624 aa
MQNPRSSAITVTADSTIPAGLRLGPVQGIFRLGKYMSDRKEHFNRKKVRFVRGHLVDEAG
DSVPEWIELIRAARHIQEQNLEAITDLPGGQIFYRTLRDIQPGEELAAWYSSTLAQWFDI
PTTATPTHDEKGEERYICWYCWRTFKYPNTLIAHIHFHCALSNGRGFINSDQCRISETFT
KSPKTADISSSSTPPRNGHQISSGPTEGVKRPASPVLAKMIMTKKSMGREEEQDRALDMS
VNSARSHGALSTISGTSSIVNTMGFHPGIRSAFKPTGLSKLISPDPSGDSSAKAIGLGFS
KVVSSLKSPRSSGESLVGASPAKCVHSIEPPLPALPCSDTNRGFPLFPSFEETSAFKHVE
RGLHASLSPSRYTPIPTSVHFERFSIPPFEGVKPFAGECNIPIMPLTVYNGELLYSPPYY
PLKFHFSNLIKYPESVTYFGAPSLNPEIGSITNIDREIAMHTQQLSSIAAEKSRSRLDSM
STTSTSSGKPKKGHLCLYCGKLYSRKYGLKIHMRTHTGYKPLKCKVCLRPFGDPSNLNKH
IRLHAEGNTPYRCEFCGKVLVRRRDLERHVKSRHPGQSVHKTESKTESSFDDPEQKSDHS
NESDVDVCFTDDQSDQDSGKNNDQ
NT seq 1875 nt   +upstreamnt  +downstreamnt
atgcaaaacccccggagctcggcgatcaccgtgaccgcggatagcaccatcccagccggt
ctgcgcttgggtcccgtgcagggcatttttaggctgggaaaatatatgtccgatcgcaag
gagcatttcaataggaaaaaggtacgctttgtcagagggcatttggttgatgaagctggc
gattcagtcccggaatggatagagttaatccgggctgccagacacattcaagagcagaat
ctggaagcgatcactgaccttccagggggacagatcttttacagaacgctgagggatatc
cagcctggggaggagttagcagcgtggtattccagcactctggctcagtggttcgatata
ccaaccacagccacaccgacacacgatgagaaaggggaggaacgttatatttgttggtac
tgctggagaacgttcaaatatccaaacactttaatagctcatatccacttccactgcgct
ctgagcaacggcaggggcttcatcaacagtgatcaatgccgaatttcagagactttcacc
aaatctccgaaaaccgccgacatatccagctcatcaacacccccgagaaatggccaccaa
atctcctctggcccaacagaaggggttaaacgaccagcgtctccagttttggccaaaatg
attatgaccaagaagtcaatgggacgtgaggaggaacaggacagagccctggacatgagt
gttaattcagccaggagtcatggagccttgagtaccatcagcggcacctcttcaattgtc
aacaccatgggctttcaccccgggattagatccgcgtttaaacccacgggattatcgaaa
ttaatttcgcctgatccaagcggggacagcagcgctaaagcaattggattgggtttcagc
aaagtggtgagcagtctgaaatcaccacgctcctccggagagagtttggtgggagcttcc
cctgccaaatgtgtccattccatcgagccgccactccctgcattgccatgtagcgacaca
aacagaggtttccctctgttccccagttttgaagagacatctgcattcaaacatgtcgag
aggggccttcacgccagtttgtctcccagccgatataccccgatcccaacgagcgttcat
tttgagaggttctccattccaccgtttgaaggagttaaacctttcgccggagaatgcaac
attcccataatgcccttaacggtttacaatggcgagcttttgtacagtcctccctactac
cccttaaaattccacttcagcaacttaattaaataccccgaatctgtcacctactttgga
gctccatctctcaacccagaaattggttccatcaccaacatcgacagagagatcgccatg
cacacgcagcaactatcgagtatcgccgcggagaagagtagatctcgactggactccatg
tccaccacgagcacgtccagtggcaagcccaaaaagggtcatctctgcttgtactgtggg
aaactctactcccggaaatacggactgaaaatccacatgcggacacatacagggtacaaa
cctttaaaatgcaaagtttgccttcgaccctttggagatcccagcaacctaaacaaacat
atccgtttgcacgcggaggggaacaccccttacaggtgtgagttctgtggcaaagtgctt
gtgcgtcgcagagacttggagaggcatgttaaatcgaggcacccggggcaaagtgtgcac
aaaacagagagcaaaacggagtcatctttcgacgaccctgagcagaaaagtgaccacagt
aacgagagcgacgtggacgtctgctttacggatgatcaaagtgatcaagattcagggaaa
aacaacgatcaatga

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