Rhincodon typus (whale shark): 109916761
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Entry
109916761 CDS
T06055
Symbol
prdm13
Name
(RefSeq) PR domain zinc finger protein 13
KO
K24645
PR domain zinc finger protein 13 [EC:2.1.1.-]
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109916761 (prdm13)
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
109916761 (prdm13)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_7th_ZNF462
zf-BED
Zf-C2H2_ZNF451
zf-C2H2_15
C2CH-3rd_BIRD-IDD
Motif
Other DBs
NCBI-GeneID:
109916761
NCBI-ProteinID:
XP_020372088
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Position
5:complement(43350575..43359237)
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AA seq
624 aa
AA seq
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MQNPRSSAITVTADSTIPAGLRLGPVQGIFRLGKYMSDRKEHFNRKKVRFVRGHLVDEAG
DSVPEWIELIRAARHIQEQNLEAITDLPGGQIFYRTLRDIQPGEELAAWYSSTLAQWFDI
PTTATPTHDEKGEERYICWYCWRTFKYPNTLIAHIHFHCALSNGRGFINSDQCRISETFT
KSPKTADISSSSTPPRNGHQISSGPTEGVKRPASPVLAKMIMTKKSMGREEEQDRALDMS
VNSARSHGALSTISGTSSIVNTMGFHPGIRSAFKPTGLSKLISPDPSGDSSAKAIGLGFS
KVVSSLKSPRSSGESLVGASPAKCVHSIEPPLPALPCSDTNRGFPLFPSFEETSAFKHVE
RGLHASLSPSRYTPIPTSVHFERFSIPPFEGVKPFAGECNIPIMPLTVYNGELLYSPPYY
PLKFHFSNLIKYPESVTYFGAPSLNPEIGSITNIDREIAMHTQQLSSIAAEKSRSRLDSM
STTSTSSGKPKKGHLCLYCGKLYSRKYGLKIHMRTHTGYKPLKCKVCLRPFGDPSNLNKH
IRLHAEGNTPYRCEFCGKVLVRRRDLERHVKSRHPGQSVHKTESKTESSFDDPEQKSDHS
NESDVDVCFTDDQSDQDSGKNNDQ
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacccccggagctcggcgatcaccgtgaccgcggatagcaccatcccagccggt
ctgcgcttgggtcccgtgcagggcatttttaggctgggaaaatatatgtccgatcgcaag
gagcatttcaataggaaaaaggtacgctttgtcagagggcatttggttgatgaagctggc
gattcagtcccggaatggatagagttaatccgggctgccagacacattcaagagcagaat
ctggaagcgatcactgaccttccagggggacagatcttttacagaacgctgagggatatc
cagcctggggaggagttagcagcgtggtattccagcactctggctcagtggttcgatata
ccaaccacagccacaccgacacacgatgagaaaggggaggaacgttatatttgttggtac
tgctggagaacgttcaaatatccaaacactttaatagctcatatccacttccactgcgct
ctgagcaacggcaggggcttcatcaacagtgatcaatgccgaatttcagagactttcacc
aaatctccgaaaaccgccgacatatccagctcatcaacacccccgagaaatggccaccaa
atctcctctggcccaacagaaggggttaaacgaccagcgtctccagttttggccaaaatg
attatgaccaagaagtcaatgggacgtgaggaggaacaggacagagccctggacatgagt
gttaattcagccaggagtcatggagccttgagtaccatcagcggcacctcttcaattgtc
aacaccatgggctttcaccccgggattagatccgcgtttaaacccacgggattatcgaaa
ttaatttcgcctgatccaagcggggacagcagcgctaaagcaattggattgggtttcagc
aaagtggtgagcagtctgaaatcaccacgctcctccggagagagtttggtgggagcttcc
cctgccaaatgtgtccattccatcgagccgccactccctgcattgccatgtagcgacaca
aacagaggtttccctctgttccccagttttgaagagacatctgcattcaaacatgtcgag
aggggccttcacgccagtttgtctcccagccgatataccccgatcccaacgagcgttcat
tttgagaggttctccattccaccgtttgaaggagttaaacctttcgccggagaatgcaac
attcccataatgcccttaacggtttacaatggcgagcttttgtacagtcctccctactac
cccttaaaattccacttcagcaacttaattaaataccccgaatctgtcacctactttgga
gctccatctctcaacccagaaattggttccatcaccaacatcgacagagagatcgccatg
cacacgcagcaactatcgagtatcgccgcggagaagagtagatctcgactggactccatg
tccaccacgagcacgtccagtggcaagcccaaaaagggtcatctctgcttgtactgtggg
aaactctactcccggaaatacggactgaaaatccacatgcggacacatacagggtacaaa
cctttaaaatgcaaagtttgccttcgaccctttggagatcccagcaacctaaacaaacat
atccgtttgcacgcggaggggaacaccccttacaggtgtgagttctgtggcaaagtgctt
gtgcgtcgcagagacttggagaggcatgttaaatcgaggcacccggggcaaagtgtgcac
aaaacagagagcaaaacggagtcatctttcgacgaccctgagcagaaaagtgaccacagt
aacgagagcgacgtggacgtctgctttacggatgatcaaagtgatcaagattcagggaaa
aacaacgatcaatga
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