Rhincodon typus (whale shark): 109916801
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Entry
109916801 CDS
T06055
Symbol
srsf7a
Name
(RefSeq) serine and arginine rich splicing factor 7a isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03040
Spliceosome
rtp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109916801 (srsf7a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109916801 (srsf7a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rtp03041
]
109916801 (srsf7a)
Spliceosome [BR:
rtp03041
]
Common components
Common spliceosomal components
SR proteins
109916801 (srsf7a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
RRM_5
zf-CCHC_5
Motif
Other DBs
NCBI-GeneID:
109916801
NCBI-ProteinID:
XP_020372139
LinkDB
All DBs
Position
39:11102333..11124961
Genome browser
AA seq
226 aa
AA seq
DB search
MSYYSRSSRASDCKVYVGDLGTGAAKGELERAFSYYGPLRNVWVARNPPGFAFVEFEDPR
DAEDAVRGMDGKVLCGSRVRVELSNGMSRKSRYGRPPARRQFDPNDRCYQCGERGHYAYD
CYRYSKRRRGSSRSRSRSRSRSRSRSRGRRYTRSRSRSRDRRTRSRSPSYSKRRSRSLTP
IRSKSRSPIGRSPSRSRSRSRSFSIKRESRSPSESSRKTPSPGRDD
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtattactccagaagttccagagcttcagactgcaaagtctacgttggtgatttg
ggaacaggagctgccaaaggagagctggagcgagccttcagctactatggccctctaagg
aatgtttgggtagcacggaatccaccaggctttgcttttgtggagtttgaagaccccaga
gatgcagaagatgctgtgcgtgggatggatggcaaggttttatgtggatcgagggtgcgc
gttgagctgtcaaatggaatgtcacgcaaatcacgctatggccgccctcctgctcgtcgc
cagtttgaccctaatgaccgttgctatcagtgtggagagcgtggccactatgcctatgac
tgctaccgttacagcaaaagaaggcgtggcagcagtcgatctcgatctaggtctcgttcc
cgttcgagatccagatcaagggggcgtcgttacacgagatcccgaagccgcagccgcgat
cgccgcacacgttcccgttctccttcgtattctaagaggagaagtcggtccctcactcca
ataaggtccaaatccagatcgccaattggaagaagcccttcaagatcacggtctcgatca
aggtctttttctattaaacgagaaagtcgctccccttcagaaagttctcgtaagacccca
agtcctggaagagatgactga
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integrated database retrieval system
