Rhincodon typus (whale shark): 109916864
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Entry
109916864 CDS
T06055
Symbol
lrrc4ba
Name
(RefSeq) leucine-rich repeat-containing protein 4B isoform X1
KO
K16360
netrin-G3 ligand
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04514
Cell adhesion molecule (CAM) interaction
rtp04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
109916864 (lrrc4ba)
04517 IgSF CAM signaling
109916864 (lrrc4ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rtp04515
]
109916864 (lrrc4ba)
Cell adhesion molecules [BR:
rtp04515
]
Immunoglobulin superfamily
NGL family
109916864 (lrrc4ba)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
ig
LRR_9
V-set
Ig_2
VEGFR1-3_N_Ig-like
LRRNT
LRR_LRWD1
Calcyon
Ig_MYOM1
Cadherin_C_2
Sp38
Insulin_TMD
LRR_6
Motif
Other DBs
NCBI-GeneID:
109916864
NCBI-ProteinID:
XP_020372202
LinkDB
All DBs
Position
37:complement(13811423..13874174)
Genome browser
AA seq
653 aa
AA seq
DB search
MGAMMMTMMKAHHTQRMRFNLGRTVCRLVFLTLWTLSLLTGLVQSHICPKGCSCSNQFSK
VICTRFELREVPDSISTNTRYLNLQENIIQVIKADTFKQLRHLEILQLSKNLIRQVEVGA
FNGLTNLNTLELFDNRLTTVPSAAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKKLEYISDAAFEGLINLRYLNLGMCNLAEIPNLTPLIKLEELELSGNRLEVIQPGSF
QGLTNLRKLWLMHAQIQLIERNAFDDLQSLEELNLSHNNLTSLPHDLFTPLHRLERVHLN
HNPWHCNCDVLWLSWWLKETVPSNTTCCARCHSPPNLKARYIGELDQSHFTCYAPVIVEP
PTDLNVTEGMAAELKCRAATSMTSVNWMTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQ
DTGLYTCLVSNSAGNATASATLNVSAVDSSNSYSYFTTVTVETVEVVDEPRSTEREPGPT
PSGRWETPYSTTSHTPRSTKSTEKAFTVPITTEVTDNIMAGLDDVMKTTKIIIGCFVAIT
FLAAVMLIIFYKLRKQHQLHKHHGQTRTIEIINVEDDMAEATPGDSCLTLPAVDHEHLNH
YTAYKAHYNNNTTTTGGGGGSTLNCTKNPLHNSVHEPLLFKSSSKENVQETQI
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgggagcgatgatgatgacgatgatgaaggcacatcacacgcagaggatgagattcaat
ttgggcaggactgtttgccgtctcgtgtttttgaccctttggactttgtcactgctgact
ggactggtccagtctcacatctgccccaagggctgctcctgcagcaaccagttcagcaag
gtgatctgcacaaggtttgagctgcgggaggttcctgacagcatctcaactaatacacgc
taccttaacctgcaggagaacatcatccaggtcatcaaggcggataccttcaagcaacta
cggcacctggagattctgcagctcagcaagaatctgatccgccaggtggaagtcggagcc
ttcaacggcctcaccaacctcaacacgctggagctgttcgacaaccggctcaccacggtg
cccagtgcggcttttgagtatctgtcgaagctccgggaactttggctgaggaacaatccc
attgagagcatcccttcctacgccttcaaccgtgtaccctcgctgcgacgcctagacctg
ggcgagctgaagaagctggagtacatttcggacgcggcttttgagggcctgatcaacctg
aggtacctcaacctgggcatgtgcaacctggcggagatcccgaacctcacacccctcatt
aagctggaggagctggagttgtctggcaaccggctggaggtcatccagcccggctccttc
cagggcctcaccaacctgcgcaagttgtggctgatgcacgcccagatccaattgatcgag
cgcaacgccttcgatgacctgcaatcgctggaggagctcaacctgtctcacaacaacctg
acatcactgccacatgacctcttcacacctttgcaccggctggagagggtccacctcaac
cacaacccctggcattgtaattgcgatgttttgtggctcagctggtggctgaaggaaaca
gtgcccagcaacactacctgctgtgcccgctgccactcaccgcccaacctgaaggcccgc
tacatcggcgagctggaccagagtcacttcacatgctacgcaccggtcattgtggaacca
cccaccgacctcaacgtgaccgagggcatggcggctgagctcaagtgccgggcggccact
tccatgacctctgtcaactggatgacccccaacggcacattaatgacccatggttcatac
cgggtgcgcatctcagtgctgcatgacggcacgctcaacttcaccaatgtgacagtgcag
gacacaggcctgtacacctgcctggtcagcaattcagccggcaatgccacagcctcagcc
acactcaatgtctcggctgttgacagcagcaacagctacagctacttcaccaccgtaaca
gtggagacagtggaggtggtggatgagcctcggtcgactgaacgcgagcctgggcccaca
ccatctggccgctgggaaacaccttactctaccacctcccacaccccccgtagcaccaag
tccaccgagaaggccttcactgtgcccatcaccaccgaggtgacagacaatatcatggct
ggcctggacgatgtgatgaagacaaccaaaattatcattggctgcttcgttgccatcacc
ttcttggccgccgtcatgctcatcatcttctataagctgcgcaaacagcaccagctccac
aaacaccatgggcagacccgcaccatcgagatcattaatgtggaggacgacatggcggag
gccacacctggtgacagctgcctgactctcccagctgttgaccatgagcacctcaaccat
tacacggcttacaaggcccactataacaacaacaccaccaccactggtggaggaggcggc
agcaccctgaactgcaccaaaaacccgcttcacaactctgtgcacgaaccgctactcttt
aaatccagctccaaagagaacgtgcaagagacgcagatttaa
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integrated database retrieval system
