Rhincodon typus (whale shark): 109916885
Help
Entry
109916885 CDS
T06055
Symbol
scube3
Name
(RefSeq) signal peptide, CUB and EGF-like domain-containing protein 3 isoform X1
KO
K24468
signal peptide, CUB and EGF-like domain-containing protein 1/3
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rtp04990
]
109916885 (scube3)
Domain-containing proteins not elsewhere classified [BR:
rtp04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
109916885 (scube3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FXa_inhibition
cEGF
Ephrin_rec_like
EGF_CA
EGF_3
EGF
CUB
hEGF
Plasmod_Pvs28
Motif
Other DBs
NCBI-GeneID:
109916885
NCBI-ProteinID:
XP_048468154
LinkDB
All DBs
Position
25:20506835..20852682
Genome browser
AA seq
1026 aa
AA seq
DB search
MQSRMGAACLSGCYCLLLILLNALTTAGSKANQEIDKNRPAGCSRLTHTDVSPDTLHCTN
PEAVSSRDVDECVEGTDNCHIDAICQNTPKSYKCICKSGYTGDGKQCEDIDECDNEYNGG
CVHECINITGNYRCMCYDGFKLAHDGHNCLDVDECADSNGGCQQICVNMMGSYECRCREG
FFLSDNQHTCILRPEEGMNCMNKNHGCAHICRETPKGGIACECRPGFELTKNQRDCKLTC
NYGNGGCQHTCDDTDQGPKCGCHLKFALHSDGKTCVETCAVNNGGCDSTCQDAATGVRCS
CPVGFTLQPDRKTCKDIDECRLNNGGCDHVCRNTIGSFECSCKKGYKLLTNERTCQDIDE
CSFDRTCDHICVNSPGSFECFCHKGYTLYGLTHCGDIDECSMNHGGCKHGCVNTLGSYQC
SCPSSGYKLHWNKKDCVEAAKCLPGSNSPRAQLSCVKSGKRETCSLSCASKAHFQAGSDN
SYTVSCGAPIRRVDAQQRLNTNITGCVETLAPPVKHRASFKIKDAKCYLHPRIKGKQDSG
RPIITGAAFPCTDNCQVTFVNLKCDSSKKAKGRRTRNPPGKEVTRITLDFEAEIRKEDIT
GNCNINCLRQKMEKKLKSAIKTLKKSINQQRFHIRFSGTDYEVAKKLAKAPEKVEACNIG
QEWVDGKCVSCSSGSFYHGLQEKCVPCPPGTYQEKDGQLSCDLCPGTDGHGPTGARNITV
CTGQCSPGHYSSDGFQPCQLCSRGTYQPEPGRTLCFQCGGGLMTKHEGALSFQDCDTKVQ
CSPGHYYNTTVHRCIRCALGTYQPEFRQNYCIACPGNTTTDFDGSTTVTQCKNRQCGGEL
GEYTGYIESPNYPGNYPANVECTWNINPPPKRKILIVVPEIFLPIEDDCGDVLVMRKNSS
PTSITTYETCQTYERPIAFTARSRKLWVNFKTNEANSAKGFQIPYVTYDEDYEQLVEDIV
RDGRLYASENHQEILKDKKLIKALFDVLAHPQNYFKYTAQESNEMLPKSFIKLLRSKVSS
FLRPYK
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcagaatgggggctgcctgtctatccggctgctactgtttgctactcattctc
cttaacgcactcaccaccgcgggaagcaaggctaaccaagaaattgacaagaatcgacca
gcaggctgctccaggctgacccatacagacgtgagccccgatacactacattgtacaaat
cccgaggctgtatcctcacgagatgttgatgaatgtgttgaaggaacagataattgtcat
attgatgctatctgtcagaacacccccaagtcatacaaatgcatctgcaagtctggatat
acaggagatggcaaacaatgtgaagatattgatgaatgtgacaatgaatacaatggaggc
tgtgttcatgaatgcataaatattacaggaaattatcgctgcatgtgttatgatggtttc
aaattagcacacgacggccataactgtctagatgtggacgaatgtgcagatagcaatggt
ggatgccagcagatctgtgtcaatatgatgggaagctatgagtgtcgatgccgagaagga
ttcttcctcagtgacaaccagcatacgtgtatcctgcggcctgaagaaggaatgaactgt
atgaataaaaaccatggatgtgctcacatctgtcgagaaactccaaagggtggaattgcc
tgcgagtgcagacccggatttgaactcacgaagaaccaacgggactgcaagttgacgtgt
aactatggaaacggggggtgccagcacacgtgcgatgataccgatcaaggcccgaagtgt
ggatgccatctgaaatttgccctgcactccgatgggaaaacctgcgttgagacctgtgct
gtgaacaatggaggctgtgatagcacgtgtcaggatgctgccacgggagtccgctgtagt
tgtccagttggattcacattacaacccgaccggaagacatgcaaagatattgatgaatgt
cgcctgaacaatggaggctgtgaccatgtctgcaggaacaccattggaagttttgagtgt
agctgcaagaagggctacaaactgcttacaaatgaaaggacatgccaagatattgacgag
tgctcctttgacagaacatgtgatcacatctgtgtgaactcacctggcagcttcgaatgc
ttttgccacaaggggtacacattgtatggcctgactcactgtggagatatcgatgaatgc
agcatgaaccatggtggctgcaagcacggctgtgttaatacactgggaagctatcaatgc
tcttgtcccagcagtggttacaaattgcactggaataagaaagactgtgtggaggcagca
aagtgcttgccgggttccaactctccccgagcacaactttcctgcgtcaagagtgggaag
agagaaacctgctcactcagctgtgcctccaaggctcacttccaggcaggctctgataac
agttacactgtgagctgtggggctcctataaggagggttgatgctcaacaacgactgaat
accaacatcacaggctgtgtagagactttagctcccccagtcaaacatcgagcttccttc
aagattaaagatgccaagtgttaccttcatccacgcattaagggaaagcaggatagtggg
cgcccaattatcacaggagctgccttcccttgtaccgacaactgtcaggttacatttgtg
aacctaaaatgtgattcttccaagaaagcaaaaggccgacggactcgcaatcccccagga
aaagaagtaacacgaataacactggattttgaagcagaaataagaaaagaagatataaca
ggcaactgcaacattaactgtctgaggcagaagatggagaagaaactgaaatctgcaatt
aaaactttgaaaaagtcaatcaaccagcagcgtttccacattcgcttctctgggacggac
tacgaagtggcaaagaaactggcaaaagcacccgagaaagtagaagcctgcaacattggg
caggagtgggtggacgggaaatgtgttagctgctcatcaggatcattctaccacggactg
caggagaaatgtgttccttgtcctcccggcacctaccaggagaaggatggacaattatcc
tgtgacttgtgtcctggaactgacggacatggaccaactggagcacgcaacattacagtg
tgcacaggtcagtgcagtccaggccattattcatcagatgggtttcagccatgccaatta
tgcagtcgaggtacatatcagcctgagccaggccggacattgtgtttccaatgtggagga
ggattgatgacaaaacatgaaggagctttgtcctttcaggactgtgatactaaagttcag
tgctctccaggccattattataacacaactgttcaccggtgcatacgatgtgccttgggt
acctaccaaccagagtttcgacagaattactgtatagcttgtcctggcaacaccactaca
gactttgatggctcaactactgtcacgcaatgcaaaaatcgtcagtgtggcggggaactt
ggggaatacacaggatacattgaatccccaaactaccctgggaattacccagcaaatgta
gagtgcacctggaacattaaccctcctccaaaacggaaaatcctgatagttgttcctgaa
atcttcttacctattgaggatgattgtggagatgttttggtcatgaggaaaaactcctca
cctacttcaatcacaacgtatgaaacttgccagacctacgagcggccaattgccttcact
gccaggtcccgcaaactgtgggtcaactttaaaactaatgaagcaaacagtgccaaaggt
ttccaaataccttacgtcacctatgatgaggactatgagcagcttgttgaagacattgtc
cgagatggtagattatatgcttcagaaaatcatcaagaaattttaaaggacaagaagctg
attaaagctctctttgatgtactggcacatccacaaaattacttcaagtacacagcacaa
gagtccaatgagatgttaccaaaatcttttatcaaattgcttcgttccaaagtttccagc
tttctaaggccctacaaatag
DBGET
integrated database retrieval system
