Rhincodon typus (whale shark): 109916906
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Entry
109916906 CDS
T06055
Symbol
ddx4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4 isoform X1
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtp03036
]
109916906 (ddx4)
Enzymes [BR:
rtp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109916906 (ddx4)
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Gene silencing
piRNA pathway
109916906 (ddx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
109916906
NCBI-ProteinID:
XP_048460311
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All DBs
Position
1:60550497..60650613
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AA seq
678 aa
AA seq
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MTEDWDAELGTEPVAIIPSFNDMAGLMNEDINGNQSFDLKGSGDGNGFNTSDRNIFGKSG
CGKQQVAGFTEAATGNKNEFDRRGGRRCGFGRGDRAGFPRVGVQNVAVKASGDGPFGRGG
SLGRGGPSERGGFGGQSGDSGGFGLNRGRTGFQLPLATRGGYRGRNEEPFSGSTSKLAGH
WKSGDVEGDKSQGPKVTYVPPPPPEEESAIFSRYQTGINFDKYDDILVEVSGFNVPPAIL
SFDEAHLCETLNKNINKAGYLKPTPVQKHGIPIVLSGRDLMACAQTGSGKTAAFLLPIIE
MLLRGNAASSRFKELQEPEVVIVAPTRELINQIYLEARKFSYGTVVRPVVVYGGTSTGHQ
IRQVLQGCNILCGTPGRLLDIISKGKVGLGKVQYLVLDEADRMLDMGFEPDMRKLVNSFN
MPPKQNRQTLMFSATFPEEIQRLAADFMKSDYLFLAVGQVGGACGDVQQSILQVDQYSKR
NKLVEILTNIGIERTMVFVDTKRKADFLATFLCQEKFPTTSIHGDREQREREIALGDFRT
GKCPVLVATAVAARGLDIEHVQHVINFDLPSTIDEYVHRIGRTGRCGNVGKAISFFDSNT
DLPIARALLKVLSDAQQEVPIWLEEFAYAAHGTSYHNPLGKVFASVDTRKGLGVNRNFSG
YETNIPVTHGGNSEDTWD
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagactgggatgcagaattgggaacagaaccagttgccattattccatctttc
aatgatatggctggtctaatgaatgaagacatcaatggcaatcagtcgtttgacttgaaa
ggatctggagatgggaatggttttaacacgagcgatagaaatatatttggcaaaagtgga
tgtgggaagcagcaagttgcaggctttacagaagctgccactggcaacaaaaatgaattt
gaccgtagaggcggaagaaggtgtgggtttggcagaggtgatcgtgccggattcccgaga
gttggtgttcagaatgttgctgtaaaagcaagtggagatggtccttttggcagaggtggc
tcacttggcagaggtggccctagtgaaagaggaggatttggcggtcagtcaggtgatagt
ggaggatttggtttaaatcgaggaagaacaggctttcagcttccccttgcaacaagaggt
ggttacagaggcagaaatgaagaacccttttctggatctacttctaaattagcaggtcat
tggaaatcaggtgatgttgaaggtgataaaagccaaggccctaaagtgacctatgttcct
cctccacctcctgaagaagagagtgctatcttttctcgctatcagactggtattaacttc
gataaatatgatgacattcttgtcgaagtttcaggattcaatgttccccctgcaatactg
tcatttgatgaagctcacttgtgtgaaactttgaacaagaacataaataaagcaggatat
ctgaaaccgacaccagttcagaaacatgggattccaattgtactttctggacgggatctg
atggcttgtgcccaaacaggctctggaaaaacagctgcattcctgttgcccataatagaa
atgctcctgaggggaaatgcagcatccagtcgattcaaggagctacaagaaccagaagtt
gttattgtagctccaacacgtgagctgattaatcagatatatctggaagctcggaagttt
tcttatgggactgttgtgagacctgttgtggtctatggaggaacgagcactggccatcaa
attcgtcaggttttacaaggttgtaatatattgtgtggcacaccaggaagacttctggat
attatttctaaaggaaaagttggccttggtaaggtgcagtacttggtattagatgaagca
gaccgtatgctcgatatgggatttgaaccagacatgcgaaaactagtcaactcatttaat
atgccacctaaacaaaaccgccagactttgatgttcagtgccacctttcctgaagagatt
cagaggttggctgcagacttcatgaaaagcgattatttgttccttgctgttggtcaagtg
ggaggtgcctgtggtgatgtccagcaatccatactgcaagttgaccagtattccaaaagg
aacaaattggttgaaatcctcactaacataggtattgaaagaactatggtttttgtcgat
accaaacgaaaggctgactttcttgctacttttctttgtcaagaaaagttcccaacgacg
agtattcatggggatcgagagcaaagagaaagagagatagcactcggtgatttccgtaca
gggaagtgtcctgttttggtggctacagcagtagcagctcgagggctggacattgaacat
gtacagcatgttattaattttgatttgccttcaactatcgatgaatatgtccatcgcatt
ggacgtacaggccgttgtgggaacgttggcaaagcaatatcgttctttgattcaaataca
gatttaccaatagcacgtgctctcctaaaagttctctctgatgcacaacaagaggttcct
atatggctagaagaatttgcttatgctgctcatgggaccagttaccataatccacttgga
aaggtgtttgcttccgtagatactcgtaagggtctaggtgttaacagaaacttcagtggc
tatgaaacaaatataccagtgacacatggaggaaacagtgaagatacatgggattag
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