Rhincodon typus (whale shark): 109917055
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Entry
109917055 CDS
T06055
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1-like
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04621
NOD-like receptor signaling pathway
rtp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
109917055
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109917055
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
rtp04054
]
109917055
Pattern recognition receptors [BR:
rtp04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
109917055
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
WHD_NOD2
AAA_22
AAA_16
WHD_MCM7
AAA_30
NB-ARC
PIF1
AAA_18
nSTAND3
Motif
Other DBs
NCBI-GeneID:
109917055
NCBI-ProteinID:
XP_048450436
LinkDB
All DBs
Position
Unknown
AA seq
641 aa
AA seq
DB search
MWFDGSSLIVCQYAEKLRSELQRDTRFTLSYVQKEDTLFEDIYTETLMELINATNEILGT
ISNLEDLFSDTGIINEDAETVFVTGDAGVGKTILLQRLQNLWSKGELCVDVKFLFKFRCQ
MFNSFRKEDKISLRDLLFKYNCYPDKDSDEIFSYIQQHPASVLFTLDGFDEINVDCNLSD
IPVISSPFDPLHPVALLMSLLHGKLLKGSKKLLTARTGINLPLRIVRKRVTLKGFSKDHL
LQYLKKFFKSEAQQNVVLAHLETNPHLSNLCSVPLFCWIIFKCYDCIQSTCSSQWLSHSV
MLTDIYLMMTEVFLNHSSQANPNEKSARSRINLFQTKKETLMRIGKLALKGIENGNFVFS
QETVTAANISEEDLQMGFIKTVGHYNGHGNQSTYEYIHLTLQSFFTAFLLVLDDEICPCD
FLALFNNNNIPKLSPNKPRDMVLAILRPTKYSSTHVLKPFSKHLQFTMWFLCGLLSNSNT
DLLLNLASPMNIEKKQSLLASYLSNCTKTQLKNLPRLHLEDGCKVHVLPHFVWLVRYIFE
MQNGATAKMAAKGICADYIKLNYCNVSSVDCGALAFILRYIRTPLALEMDNNNINDYGLE
QMVSCFRQLTVLRLSVNQITDQGVHILVEELKKHQKIRSLG
NT seq
1922 nt
NT seq
+upstream
nt +downstream
nt
atgtggtttgatgggtcttccctgattgtttgccaatatgctgaaaaactcagatcagaa
ttgcaaagagatacaaggttcacgttgtcatatgtccaaaaggaagataccctgtttgaa
gatatttacactgagactctcatggaattgattaatgcaacaaatgagatcctaggaacc
atttccaacttggaggatttgttcagtgacacaggcatcatcaatgaggatgcagagaca
gtgtttgtaactggtgatgctggggttggtaagaccatcctgctccagagacttcagaac
ctgtggtccaaaggagagctctgtgttgatgttaaattccttttcaaatttagatgccag
atgtttaatagcttcagaaaggaagataagatttctctcagagatctactgtttaaatac
aactgttaccctgacaaagactccgatgagatatttagttatatccaacaacacccagct
tctgttctcttcacactggacgggtttgatgaaattaatgttgactgcaaccttagtgat
atccctgtaatctcttcaccctttgaccctttgcatcctgttgccctcttaatgagcctt
cttcatggaaagttattgaaaggttccaaaaaattattgacagcaagaactggcataaac
ctaccattgagaatagtgagaaagagagtgacactaaagggcttctccaaggaccattta
ttgcaatatttgaagaagtttttcaaaagtgaggcccagcaaaatgtggttttggcccat
ctggagacaaaccctcacctgagcaatttatgttcagtgccactcttttgttggattata
tttaaatgttatgattgcatacagtccacttgtagttcccagtggttatcacattctgtt
atgctcactgatatttacctcatgatgactgaagtcttcctcaaccattcttctcaggcc
aatccaaacgagaaaagtgcaagaagccggataaacctgtttcaaaccaaaaaggaaact
ctcatgcgaatcggtaagctggctctaaaaggcattgaaaatggaaattttgtgtttagt
caggagacagtcacagcagcaaatatttcggaagaagatttacagatgggcttcatcaaa
actgttggtcattataatgggcatggaaaccaatcaacatatgagtatattcacttaaca
cttcagtcattttttactgcatttttattagttctggatgatgagatctgtccatgcgac
tttcttgcactcttcaacaataataacataccaaaactgtcacccaacaagccacgtgat
atggttttagctatcttgaggcctacaaagtattcctcaacacatgtcctcaagcctttc
agcaaacatctgcaatttaccatgtggttcctctgtggattgctgtcgaacagcaacact
gacctgttgctaaacctcgcatctccaatgaacattgagaagaaacaatcactgctggca
tcttacctgtccaactgtacgaagacacagttgaaaaatcttcctcgcttgcaccttgaa
gatggctgtaaggttcatgtgctaccacatttcgtatggctggtgaggtacatatttgaa
atgcagaatggagcaacagccaaaatggcggccaaagggatctgtgctgattatataaag
ctgaactactgcaatgtttcttctgttgactgtggcgctcttgcatttattttgcgttat
atccgaacaccccttgcactggagatggacaacaacaacatcaatgattatggtttagag
caaatggtctcctgtttcagacaactcacagtcctcagattgagtgtaaatcagatcaca
gaccaaggagttcatatcttggttgaagaactcaaaaagcatcagaagatcagatcactc
gg
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