Rhincodon typus (whale shark): 109917146
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Entry
109917146 CDS
T06055
Symbol
snap47
Name
(RefSeq) synaptosomal-associated protein 47 isoform X1
KO
K18212
synaptosomal-associated protein 47
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109917146 (snap47)
Membrane trafficking [BR:
rtp04131
]
SNARE
SNAP-25 (Qb,c)
SNAP-47
109917146 (snap47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GRAM
FERM_C1_MyoVII
Motif
Other DBs
NCBI-GeneID:
109917146
NCBI-ProteinID:
XP_048452042
LinkDB
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Position
4:complement(91630389..91691900)
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AA seq
419 aa
AA seq
DB search
MNKNLCIHSWPGSYYLDSEKRWVYGKLSLTPGQLAFTSDKEGLTLTSFKLSAITSIKKEA
SSFIFSSLTVLVNGNEKHWFSSLQPNRTVVFNVIEHFWQAQLLSSEGVEVEASPDRTSKG
KQLIHLASSSHQRLEDTAKVLLHQGEQFDRIMKGLDKIESDMDVANRLLTELESPPWWPF
SSRHRKAQQEAKSRQELPRSASKAFGKEGLILKVPVLYSQGQDPNLKQGTLAVLCSGLEI
CDSNDELVHKFRREEVDDVKVQSPYEMVVRQRFIGKPDISFTLQSAKMTDVVSIVEIQYS
KKVQFRDDLLGLFRPEDSPVSENLSMGGSIWNAATGFLDRVMHPVSASGGQMSQQVSEQT
VSEAEAQELRQILRKLKTIALDTEAELERQDEVLDVISSSTDQATSRINMSHRRMRKLL
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaacttgtgcatccattcctggcctggttcatactatctcgacagtgagaaa
cgatgggtttatggcaaactgtcgctcacaccaggccaattggcatttacatccgacaag
gaggggcttacgctgaccagcttcaagctctctgccatcaccagcatcaagaaggaggca
tccagcttcatattcagctcactcaccgtgctggtaaatggcaatgagaagcactggttc
agctcactgcaacccaatcggacagtggtgtttaacgtaatcgagcacttctggcaagca
cagttgctttcgtcggaaggggtggaagtagaggccagccctgatcgcacatccaaggga
aagcagcttatccacttggcttccagctcccaccaacgcttggaagacacggcaaaagtc
ttgcttcatcagggagagcagtttgatcgcatcatgaaagggctggacaagatcgagtca
gacatggatgtggcaaacagactgttaactgaactggagtctccaccgtggtggccgttc
agcagtcgccaccgaaaggctcaacaggaagcaaagagtcggcaagaactcccacgctct
gcctcaaaggccttcgggaaggaaggcttgatattaaaagtccctgtcctttactcccaa
ggtcaagatcccaacctgaaacagggtacacttgcagttctttgctcaggtctggaaatc
tgtgattcaaatgacgagcttgtgcataagttccgaagggaggaggtcgatgatgttaaa
gtgcaaagcccttatgaaatggttgtccgtcagaggttcatagggaagcccgatatctcc
tttaccctacagtctgcgaagatgactgatgttgtttccattgtggagatacagtactcc
aaaaaagtgcaattcagagatgatttgttggggctcttcagaccagaggactctcctgtt
tcagagaacctcagcatgggcggctccatatggaatgcagcaactggcttcttggataga
gttatgcatcctgtttcagcaagcggtggacagatgtctcaacaagtgtctgagcagaca
gtttcggaggccgaggctcaagagctgagacagatcttacggaagttgaagacgatcgcg
ctggatactgaggctgagctagaacgccaggatgaagtgttggatgtcatcagttcctcc
acggaccaggcaacgtcccggataaacatgagtcaccggcgaatgcggaaactcctgtag
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