Rhincodon typus (whale shark): 109917158
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Entry
109917158 CDS
T06055
Symbol
phgdh
Name
(RefSeq) D-3-phosphoglycerate dehydrogenase
KO
K00058
D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:
1.1.1.95
1.1.1.399
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp00260
Glycine, serine and threonine metabolism
rtp00270
Cysteine and methionine metabolism
rtp01100
Metabolic pathways
rtp01200
Carbon metabolism
rtp01230
Biosynthesis of amino acids
Module
rtp_M00020
Serine biosynthesis, glycerate-3P => serine
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
109917158 (phgdh)
00270 Cysteine and methionine metabolism
109917158 (phgdh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtp04147
]
109917158 (phgdh)
Enzymes [BR:
rtp01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.95 phosphoglycerate dehydrogenase
109917158 (phgdh)
1.1.1.399 2-oxoglutarate reductase
109917158 (phgdh)
Exosome [BR:
rtp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109917158 (phgdh)
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Gene cluster
GFIT
Motif
Pfam:
2-Hacid_dh_C
2-Hacid_dh
PGDH_inter
Motif
Other DBs
NCBI-GeneID:
109917158
NCBI-ProteinID:
XP_020372538
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All DBs
Position
7:46329247..46376216
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AA seq
529 aa
AA seq
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MALSVCNCLISERVDASCKKILEENGIKVVQRETMTKNELLAEIKDYDGLIIRSGTKVTA
DVINAAKNLKIIGRAGTGVDNVDVETSTRNGIIVMNTPNGNTISAAEMTCAMIMCLARQI
PQGVASMRAGNWERKKFMGMELFGKVLGIVGLGRIGKEVAIRMQSFGMKTIGYDPIIPAE
VAATFGVEFLALEHLWPQCDFITVHTPLTPSTKGLLNDENFAKCKKGVKVINCARGGIID
EKALLRALESGQCGGAGLDVFEEEPPKNLSLVKHPNVVSCPHLGASTHEAQRRCGKDIAT
QIVDMVTGKSLVGVINAQALSHAMTPETKPWIQLGEALGLVAKACTGQGNGKIKAQVTTL
GTFLKNAGNCVATAVVVGLLKGDLENHVNLINASLFAKEAGLDITAKHSDSTPEFSTDEC
ALEISTSGVSHKLVGSVQAGVPVLLEIDGAVFGKVVPLKGNLLIYKSAQNPHNLASVVGV
LASAGIQIESYCVSAVLDGEQWNIMNIAALLVDLNPLQPYMKEVIQLAI
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggctttatccgtctgtaattgcctcatcagtgaacgcgtagatgccagctgcaagaag
attctagaagaaaatggcatcaaagtggtccagagggaaacaatgaccaagaatgagctc
ctagctgaaattaaggactatgatggtcttattatccgttctggaacaaaggttactgct
gatgtcataaatgctgcaaagaatctgaagataattggcagagctggaactggagtagat
aatgtggatgtggaaacatcaacaaggaatggaatcattgtgatgaacacaccgaatgga
aacacaattagtgctgctgaaatgacttgtgcaatgatcatgtgcctggccaggcaaatt
ccacagggagttgcttccatgagagctggaaactgggagagaaagaagttcatgggcatg
gagttgtttgggaaagtccttggaattgtaggacttggaagaattggcaaagaagtagca
atcagaatgcaatcatttggaatgaagaccataggctatgatccaataattcctgctgaa
gtggctgctacatttggagtagaattcctggctctggaacacctgtggccacaatgtgac
ttcatcactgtccacacccctttaacgccatctaccaagggtttgttgaatgatgagaac
tttgccaaatgtaaaaagggagtcaaagttattaattgtgctcgaggaggtattattgat
gagaaagcgttacttcgggcattggaatctggacagtgtggtggtgcaggactggatgta
ttcgaagaggaaccacccaagaatctttctctagtgaaacatccaaatgtagtcagttgt
ccacatctaggtgccagcacccatgaagcccagagacgctgtggaaaggacattgcaact
caaattgtggacatggtcacgggcaagtcattagttggagtgattaatgcccaggctctt
agccatgctatgacccctgaaaccaaaccctggatccagcttggggaagcactaggtttg
gtggcaaaagcatgtactggacaaggaaatggtaaaatcaaagcacaagttacaacacta
ggcacattcttgaaaaatgctgggaactgtgttgccacagctgtggtagtaggattgctt
aaaggagacttggaaaaccatgtcaatctcatcaatgcatccctgttcgcaaaagaagca
ggactggatataactgctaagcacagcgattcaactccagaattttcaactgacgaatgt
gcactggaaatttcaacttctggtgtctcccataaacttgtgggctctgtacaagcaggt
gttcctgtgctactggaaattgatggagcagtgttcggaaaagtagttcccctcaaggga
aacctattgatttacaaatctgcacaaaatcctcacaatttggcatctgttgtgggtgtg
cttgcttcagctggaattcagattgagtcatactgtgtttcagctgttttggatggagaa
cagtggaatattatgaacattgctgcattattggtggatctgaatcctcttcagccatat
atgaaagaggtgatacagctggcaatatga
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