Rhincodon typus (whale shark): 109917171
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Entry
109917171 CDS
T06055
Symbol
rbm12
Name
(RefSeq) RNA-binding protein 12
KO
K24526
RNA-binding protein 12
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rtp03041
]
109917171 (rbm12)
Spliceosome [BR:
rtp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
109917171 (rbm12)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
109917171
NCBI-ProteinID:
XP_020372549
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Position
19:complement(2717114..2917352)
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AA seq
834 aa
AA seq
DB search
MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGELGEAFIVFSTDEDARLGMMRG
GGTIKGSKVSLLLSSKTEMQNMIELSRRRFETGNVDMPPVGSSRPGPTSNTGITARGSLP
TTMPNLNTPTMVTTTSSLHESIGNKNVPTFSAASMGSTSSSLNPTFTSPGFSMGSTIAST
MPPLNTINSVPPLPPLPPLPTMPSLPPMPSVPPIGILPPVPPLPPIAPLAPIPPMPPIPP
LPSLPPMPINAGSTLPLGSSGPSGMNGSGSALGISNSISSMYMGPIGSLNPLHPMNSHSS
INKGPPPITSNDVYVHIYGMPYTAMESDVREFFHGLRIEAVHMMKDHLGRNNRDAMVKFY
SSSDTFEALKRHGKMMMGQRFANVFPATERQWLNATVGFSTPKSMAPPPSIGHYGQNLPP
FHTSRSESPSKRERSRSRSPHEKEFCVYLKGLPYEAENKHIMEFFNKLELIEDSIYIAYG
PSGRATGEGFVEFKTPTDYQAALCRHKQYMGNRFIQVHPITKKAMLEKLENIQKRAHNFV
QNEQKREVTVKTEEVSGSPKICGHIWNIPYNVTKSDVFQFLEGIGLAENGVQILVDSNGQ
GLGQALVQFLNEEEAQKAERLHRKKLNGRNAFLQLITLEQKQEMETNPPFQTKSQKNPNQ
GSLDPTFLPCVGGDSIFSPSVSSGNLNGPVPPFNPVSSFSGSTNLFGQGPSPGSGVSVSI
GDGPTGGPVFGSSTVSSFPGAGVEPRVGSGPLSTKSPTVVKVQNLPFKVSVDEILDFFYG
YRVIPDSVCLQFNEQGMPTGEAMVAFESCNEAMSAVVDLSDRPMGSRKVKLVLG
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggccgtggtcatccgcttgcagggtctccccattgtggcggggaccatggatatccgc
cacttcttctctggattaaccattcctgatggtggtgtgcatattgtaggtggtgaactt
ggtgaggctttcatcgttttctccacagatgaagatgcacggcttggtatgatgcgtggt
gggggtacaattaaaggatccaaagtatcactcctactgagtagtaaaactgaaatgcaa
aatatgattgagctgagtcgtaggcgttttgaaactggtaatgtggatatgccaccagta
ggctcaagcagaccagggccaactagtaatactggtattactgcgaggggtagtttacct
acaactatgcctaacttaaacactcccactatggtcaccacaacttcctcattacatgaa
agcatagggaataaaaatgtgcccactttttctgctgccagcatgggaagtacatcctcg
agcctcaatcccacttttaccagccctgggtttagcatgggttcaacaatagccagcact
atgccgccactgaatacgataaactctgtaccacctttgccaccacttcctcctttacct
acaatgccatcactgccgcctatgccttcagttcctccaattggtatcttgccaccagtg
cctccccttcctcctatagcacctcttgctccaattccacccatgccaccaatacctcca
ttgccaagcttaccacccatgcccatcaatgcaggtagtactcttcctctaggaagctct
gggcccagtggaatgaatggttctgggtctgcattgggcatcagtaatagcataagttcc
atgtacatgggtcctataggttcattaaatccactgcaccccatgaattcccatagttca
attaacaaaggaccaccaccaattacttccaatgatgtgtatgtccatatctatgggatg
ccatacactgcaatggaatcagatgtaagagaattttttcatggacttcgaattgaagcg
gtgcacatgatgaaagatcatctaggtcgcaataatagagatgcaatggtgaagttttat
agttcctccgacacgtttgaagctctgaaacgacatggaaaaatgatgatgggacagaga
tttgctaatgtattccctgcaacagagaggcagtggctcaatgctactgttggctttagt
acacccaaaagcatggcccccccaccttccattgggcattatggacagaacctacctcca
tttcatacatctaggtctgaatctccaagcaaacgtgaacgatcgcgatcacgctcgcct
cacgagaaggagttctgcgtttatttgaaaggcttaccatatgaggctgaaaataagcac
atcatggaattcttcaataaactggaactcatagaggatagcatctacatagcctatgga
ccaagtggaagagcaacaggtgaaggctttgtagaatttaaaactcccactgattaccag
gcagctttgtgtcgccacaaacagtacatgggcaatcgcttcatccaagttcatccaatc
actaaaaaagcaatgttggagaagctagaaaatattcagaagcgagcacacaactttgtg
caaaatgagcagaagagagaagtaacagtgaaaactgaggaagtgtctggttcaccaaaa
atttgtggtcatatatggaatatcccttataatgtaacaaaaagtgatgtgttccagttt
ttggaaggtattggactagcagaaaatggtgtccagattcttgttgactctaatggccaa
gggcttggacaggcccttgtgcagttcctaaatgaagaggaggcacagaaggctgagcga
ctgcatcgcaagaaattaaatggacgtaatgcatttcttcaactaatcactcttgaacaa
aaacaagaaatggaaacaaatccaccatttcaaacaaagagccagaagaatccaaaccaa
ggaagtcttgatcctactttcctcccctgtgttggaggtgacagcattttttctccaagt
gtcagttcaggcaatcttaatggccctgtaccaccattcaaccctgttagtagctttagt
ggatcaactaacctgtttggacaagggccgagtcctggatcgggggtcagtgttagtatt
ggtgatggcccaacgggtgggcctgtttttggaagcagcactgtcagcagttttccagga
gcaggggttgagccaagggttggaagtggtcctttaagtaccaaaagcccaacagtggtt
aaagtgcaaaatttgcccttcaaagtatccgtggatgaaattttggatttcttttatggc
taccgtgtgattcctgactctgtgtgcttgcaattcaatgagcaaggcatgcctacaggt
gaagcaatggttgcttttgaatcctgcaatgaagcaatgtcagctgtcgttgacctgagt
gatagacctatgggatctaggaaagtgaagctagtcttgggataa
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