Rhincodon typus (whale shark): 109917223
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Entry
109917223 CDS
T06055
Symbol
hcn2b
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rtp04040
]
109917223 (hcn2b)
Ion channels [BR:
rtp04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
109917223 (hcn2b)
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Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
109917223
NCBI-ProteinID:
XP_048469879
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Position
29:complement(26403651..26489932)
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AA seq
666 aa
AA seq
DB search
MDEDDENEEDTRSKSIRMKAIPSPPGGGAGRGYLNTDKQPGESNQGEVETAVGMKCNTNG
DCRVTQGSQSSINRTDESEEKKDAIEGGGVSRSEDKRENKVAFSAEPPSRTCSQFQQRGR
NSVSLHKSEGAEQIFPEDSEQNGSQASFMQRQFGSMLQPGVNKFSLRMFGSQKAVEREQE
RVKSAGAWIIHPYSDFRFYWDFTMLLFMVGNLIIIPVGITFFKEETTTPWIIFNVVSDTF
FLMDLVLNFRTGIVIEDNTEIILDPQKIKKTYLKSWFIVDFVSSIPVDYIFLIVEKGIDS
EVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVMRIFNLIGMM
LLLCHWDGCLQFLVPLLQDFPNDCWVSLNNMVNDSWSELYSFALFKAMSHMLCIGYGRQA
PESMSDIWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPA
DFRQKIHDYYEHRYQGKMFDEDNILGELNEPLREEIVNFNCRKLVASMPLFANADPIFVT
AMLTKLKFEVFQPGDYIIREGTIGKKMYFIQHGVVSVHTKGNKEMKLSDGSYFGEICLLT
RGRRTASVRADTYCRLYSLSVDHFNEVLEEYPMMRRAFETVAIDRLDRIGMHSILITLLN
IISSIF
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagacgacgagaacgaggaggatacgcgcagcaaaagcatcagaatgaaagcg
atcccgtctcccccaggagggggagccggccgaggctacctcaatacggacaagcagccg
ggggaatcgaaccagggcgaggtagagacagcggtgggcatgaagtgcaacacgaacggg
gattgcagggtgacccagggaagccaatcgtccatcaaccggacggatgagagtgaggag
aagaaagacgcgatagagggagggggtgtctcccgcagcgaggacaagagggagaacaaa
gtggctttctcggcggagccgcccagcagaacatgctcgcagttccagcagcgcggcagg
aactccgtgagcctgcacaagtccgaaggggccgagcagatcttccccgaggattccgag
cagaacggcagtcaggccagcttcatgcagcgccagttcgggtctatgctgcagccggga
gttaacaagttttccctgcggatgttcggcagccaaaaggctgtggaaagggagcaggag
agagtcaaatcggccggagcctggattatccacccttacagtgactttcggttttattgg
gatttcacaatgctgttgtttatggttggaaatctcatcattattccggtaggaatcacc
ttcttcaaggaagaaaccaccactccttggattatctttaatgtcgtgtctgatactttc
ttcctcatggatttagtcctaaacttcagaactggaattgttatagaagataacaccgag
atcatactggatccacagaaaattaagaagacatatttaaaaagctggtttattgtagac
tttgtctcttcaatccccgtggattatatatttttgatagtagaaaaaggaatcgattca
gaagtttacaaaactgctagagcactacgaatagtgcggtttacaaaaattctcagtctt
ttacgattattgagactctcaaggttgataaggtacattcatcaatgggaagagatcttc
catatgacctatgaccttgccagtgcagtcatgcgaatatttaaccttattggaatgatg
cttcttttatgccactgggatggatgcctgcaatttcttgtgccattgcttcaagatttt
ccaaatgattgctgggtttctttaaataacatggtgaatgattcctggagtgaactctac
tcttttgcactgtttaaagcaatgagccacatgctctgcataggctatggtcgtcaggct
ccagaaagcatgtctgacatctggctaacaatgttaagcatgatagttggtgccacctgc
tatgccatgtttattggtcatgcgactgccctgatccaatctttggattcatcgcgccgt
cagtaccaagaaaagtacaagcaagtggagcagtacatgtcttttcacaagttacctgct
gacttccggcaaaagattcatgactattatgagcatcgttaccaggggaaaatgtttgat
gaggacaatatactgggagagctaaatgaaccgcttagagaggaaatagtgaattttaac
tgccggaaactggtagcctctatgccactttttgccaacgcggacccgatttttgtgaca
gcaatgctgaccaagctgaagtttgaagttttccaacctggagattacatcatccgtgag
gggacgattggaaaaaagatgtattttatccagcatggtgtggttagtgtccacacaaag
ggcaacaaggaaatgaaactgtcagatggctcatattttggagaaatctgtttattgaca
agaggcaggcgaaccgccagtgttcgtgctgatacctactgtcgtctgtattctctctct
gtggatcattttaatgaggtattggaagaataccccatgatgcgaagagcctttgaaact
gtggccatcgacagactggatagaataggtatgcatagtatccttataacactcctaaac
attatctcttctatcttctaa
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