Rhincodon typus (whale shark): 109917248
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Entry
109917248 CDS
T06055
Symbol
cars1
Name
(RefSeq) cysteine--tRNA ligase, cytoplasmic isoform X1
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
109917248 (cars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rtp01007
]
109917248 (cars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rtp03016
]
109917248 (cars1)
Enzymes [BR:
rtp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
109917248 (cars1)
Amino acid related enzymes [BR:
rtp01007
]
Aminoacyl-tRNA synthetase
Class I (G)
109917248 (cars1)
Transfer RNA biogenesis [BR:
rtp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
109917248 (cars1)
Prokaryotic type
109917248 (cars1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
Arc1p_N_like
DUF5713
tRNA-synt_1
Motif
Other DBs
NCBI-GeneID:
109917248
NCBI-ProteinID:
XP_048462769
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All DBs
Position
17:4904133..4969139
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AA seq
826 aa
AA seq
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MEAGETSQYSKFLGLSTESRMKALNDHLAGRSYIGGFTFSQADVEVFRSLPKPPLDQYFH
VVRWYRHIAAIWDCTQDDAKTCELHTSKAKRTQPPWAPPSKVKQPELQLYNSLTRRKEIF
HPQNGKRVLWYCCGPTVYDASHMGHARSYISFDILRRILMNYFKYDVFYCMNITDVDDKI
IKRARQNHLFEQYKEKNVFPTQLLQDTRTALKSFSVKLAETTDPDKKQMLQRVNQAVESS
VKSLEEAMQQALSNGEITKRAKVLLDDSKDMLSDWLDVQFGSQVTDNSIFSTLPKYWEGE
YHKDMAVLNVLPADVLTRVSEYIPEIVQFVKQVVDNGYGYVSNGSVYFDTVKFDSSEKHS
YAKLVPEAVGDQKALHEGEGDLSISADRLSEKHSPNDFALWKASKPGEPSWDSPWGKGRP
GWHIECSAMAGSILGESMDIHGGGFDLRFPHHDNELAQSEAYFENDHWVRYFLHTGHLTI
AGCKMSKSLKNFITIKDALNANTGRQLRLAFLMHSWKDTLDYSSNTMESAVQYEKFLNEF
FLNVKDILRSPTDTTGQFERWQEQELTLNNRFYEKKAAVHRALCDNIDTRAVMEELRSLV
SQCNTYIAAKKSNKQLPNRMLLRNVALYLTEMLKIFGAIEGEEPIGFPVGGGSENLNLEA
TIMPYLKVLSDFRENVRQIAREKKASEVLQLCDDLRDDILPELGVRFEDHEGLPTVVKFV
DRETLLREREEKKRIEEEKKRKKEEAAQKKREQEAAKLAKMKIPPSELFRSEKDKYSKFD
ENGFPTHDAEGKELSKGQTKKLRKLYEVQEERYNEYMQTLQNSSTN
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atggaggccggtgagacttcccagtacagcaagttccttggtttatccactgaaagtaga
atgaaggctttgaatgatcaccttgctgggcggagttatatcggtggcttcacattctca
caagctgacgtggaagtattccggtcacttccgaaaccacctcttgatcaatacttccat
gtggtgcgatggtacaggcacattgcagcaatttgggactgcacccaagatgatgccaag
acctgtgaactccacacatctaaagcaaaaagaacccaaccaccatgggcgccaccatca
aaagtgaaacagcctgagctacaactgtataacagtttgacacgtagaaaggagatattt
catccccagaatgggaagcgtgtgttgtggtactgctgtgggcccacagtttatgatgct
tcacacatgggacatgccaggtcctacatctccttcgatatcctgcgacgaattctaatg
aactacttcaaatatgatgtattctactgtatgaacatcacagatgtggatgacaagatt
atcaagcgagcccgacagaatcacttatttgaacagtacaaggagaaaaatgtatttcct
acacaacttctacaggataccaggactgctctgaagtctttctctgtgaaacttgctgaa
accactgacccagacaagaagcagatgctgcagagagttaatcaagcagttgagtcatcc
gtcaaatccctggaagaagcaatgcaacaagcgctttccaatggggagattaccaagcga
gctaaggtgctgctggatgattcaaaggatatgttgtctgattggctagatgttcaattt
ggtagtcaggtgactgacaattccatcttttctactcttcctaagtactgggagggagaa
tatcacaaagacatggctgtgcttaatgttttgcctgcagatgttttaactcgagtgagt
gagtatattcctgagattgtgcagtttgttaagcaggtggttgataatggttatggatat
gtctccaatggttcggtatactttgacacggtgaaatttgacagcagtgagaagcattca
tatgccaaattggtgcctgaggctgttggagaccagaaagcactgcatgaaggagaaggt
gaccttagtatttcagctgatcgattaagtgagaagcactctcccaatgattttgcactg
tggaaagcctccaagcctggagaaccatcttgggattcgccctggggaaagggccgccct
gggtggcacattgaatgctcggcgatggctgggagcatcctaggagagtccatggacatc
catggtggaggatttgacctgcgattccctcatcatgacaatgaattggcccagtctgag
gcttattttgaaaatgaccactgggttcgatacttcctccatactggacacctgaccata
gcaggttgcaagatgtcaaaatctttaaaaaattttataaccatcaaagacgcactgaat
gcaaatacaggtcgacagctgcgtttggcgtttctcatgcactcctggaaggacacactg
gattattccagcaataccatggagtcagctgttcagtatgaaaagttcttaaatgagttc
ttcttgaatgtgaaggatattttgcggagccccacagatacaacaggacagtttgagagg
tggcaagagcaggagttaacactcaataaccgcttttatgagaagaaagcagctgtgcac
agggcactgtgtgataacattgacacccgtgctgttatggaagagctgcgttcccttgtg
agtcaatgtaacacatacattgcagcaaagaaaagcaacaaacagttaccgaatcggatg
ctgttgaggaacgtcgcattgtatcttaccgagatgctgaagatttttggagcaatagag
ggtgaagaaccaattggattccctgttggaggaggcagcgagaatttaaatttggaagcc
accatcatgccctacctgaaggtactatcagattttcgtgagaatgtgcgacaaattgcc
cgtgagaagaaagcgagtgaggttctccagctgtgtgatgaccttcgagatgacatcctt
ccagagcttggagttcgttttgaagaccatgaaggattacctactgtggtgaaatttgtg
gaccgagagacattgctgagggagagagaagagaagaaaaggattgaagaagagaaaaag
aggaagaaggaagaagcagcccagaaaaaacgagaacaggaggcagcaaaactggccaag
atgaagatccctcccagtgaactgttcagatcagaaaaagacaaatattccaaatttgat
gagaatgggtttccaactcatgatgctgagggcaaagagcttagcaagggtcagaccaag
aagcttcgaaaactttatgaagtccaagaggaacggtataatgagtatatgcagactttg
cagaatagcagcaccaactaa
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