Rhincodon typus (whale shark): 109917311
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Entry
109917311 CDS
T06055
Name
(RefSeq) transmembrane channel-like protein 3
KO
K21988
transmembrane channel-like protein
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtp02000
]
109917311
03037 Cilium and associated proteins [BR:
rtp03037
]
109917311
Transporters [BR:
rtp02000
]
Other transporters
Pores ion channels [TC:
1
]
109917311
Cilium and associated proteins [BR:
rtp03037
]
Other cilia and associated proteins
Stereociliary proteins
109917311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
109917311
NCBI-ProteinID:
XP_048471910
LinkDB
All DBs
Position
33:complement(4671313..4725238)
Genome browser
AA seq
1108 aa
AA seq
DB search
MTEAASNKSSKTSQRLKNIRKNSISRRIYSAAYEEHENSNSEDDEQDDEKADCKDPEEIF
QNIQIQKEIISNIRCRPWSMRQKLKALRQAKEIVLKYEGRLTRTRGYQAAGAEIWKKFGR
LVCNITVLFIPWEMRIKKIESHFGSGVASYFIFLRWMFGINIVLTIMTGAFVILPELLAG
APFGSIPSKTIPAGYVASAQDLDTIWSLGGYLQYSVMFYGYYGNERKIGRAGYRLPLAYF
TVGMAVFAYSFIILLRKMAKNSQLSMASASDENYTFCWKIFCAWDYLIGNPEAAESKTAA
VINNIREAILEEQVKRKDRSLAVVISLRILANILVLLSLAGSIYIIYFVVDRSQELERTK
AELSLWEKNEVSVVVSLITMIAPSVFELVAQLEMLHPRTTLRFQLARVLVLYLGNLYSLI
IALLDKVNSMSMTDNSNDTGTAFLATRVLPEEESLSTIVPEIRLRWNSSFGSEDNKTKPL
TKYNRTALFDYNVLSQQDQCWETYVGQEMLKLSIIDMLFTVGSILLIDFIRGLFVRFLSD
CWCWDLESKFPEYGEFKIAENVLHLIYNQGMIWMGAFFSPCLPAFNVLKLIGLMYLRSWA
VLTCNVPHQQVFRASRSNNFYLAMTLFMLFLCMLPTVFAIARYRPSPSCGPFSGQDKIYD
IVSETIVNDFPVWFNTVMSYVTSPVVALPALLLLFMLIYYLQSIARSLKFTNNQLRMQLQ
VERTEDKKKVFQMAVARFQHLEDGDKKTERESEVDSQESLIQSSPRRNGSVANVDSPVSA
GSHILSISQQLAHADVPQIPSLTHTPTAAASRHKREHAFPRNPGGLQGAASGPHRGKLSS
SCATKLPEDIRPDAPFRKCVRPLHYSPAEGAPQMILGRRVHTARYILVNEREPRKRLMRS
VTRLPRHYKVDETRGAVEMLPRNLKRYAFHAGHRTNPQLHVSEEEEDEDELERGTFSRSP
RPHSLSDLHQPTRFYIGDSKDSRILVGKDVAQIQYEYEDSEPQQDCAGPGSSHVQWTSKG
LAPSQQGAGAPIKWKTKHKAEQSLTESDSASIASSSDQQNSSTDQYIQVIHTKDKYLKTS
NENLSRSKSRVSIELNAAEANELICSNV
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgactgaggcagccagcaacaaatcctcaaagacatcgcagcggctcaaaaatatccgc
aaaaactccatcagccgcaggatttactcggcagcttatgaagagcatgagaacagtaac
tcggaggatgatgagcaggacgacgaaaaggctgactgcaaggatccagaagaaatcttc
cagaatattcagattcagaaagaaattatctctaacattcgctgcagaccctggtcaatg
cgtcagaagctaaaggcgctcagacaagccaaggagattgtattgaaatatgaaggcaga
ttgacaaggacaagaggctatcaggcagcaggggcagaaatatggaaaaaatttgggcga
ctcgtgtgtaatatcaccgtgctctttatcccctgggaaatgagaatcaagaagatagaa
agtcactttggctctggagttgcctcgtattttatctttttgagatggatgtttggcatc
aacattgtgctgacgataatgactggagcatttgttatattacccgagcttttagcaggc
gcaccatttggaagtattcccagcaaaacaattcctgcaggatacgtagcatcagctcag
gatctggacaccatctggtcacttgggggctacctccaatattctgtcatgttctatggt
tactacggcaacgagaggaagattgggagggcaggctaccgtttgcctctggcctacttc
acggtgggaatggctgtgtttgcctatagcttcatcattctcctgcggaaaatggcgaag
aattcccagttgagcatggctagtgcttctgatgagaactacaccttctgctggaagatc
ttctgtgcctgggattatctgattggtaatccagaagctgcagagagtaaaacggctgca
gtaatcaacaatattcgggaagcaattctggaggagcaagtgaagcggaaagacagaagc
ttggcagtggtaataagcttgaggatccttgccaacattctggtgctcctctcgcttgcc
ggcagtatttacatcatttattttgtcgtcgatcgctcacaggagttggagcgcacgaaa
gctgagttgtcgctgtgggaaaagaatgaggtgagtgtcgtcgtttccctcatcaccatg
atcgctccctcggtgttcgagctcgtggcccagctggagatgttacacccgagaaccacc
ctgcgcttccagctcgccagggtgttggtcctgtatttgggcaatctctacagtttgatc
atcgcgctgcttgacaaggtgaacagtatgagcatgacggataattccaatgatacgggc
acagcgtttttggcaactagagtcctccctgaggaagagagcctctcgaccattgtccct
gagattagactgaggtggaacagctccttcggttcagaagacaacaaaacaaaaccatta
accaaatataacaggacggctctgtttgattacaacgtattatctcagcaggatcaatgt
tgggaaacctatgttggacaggagatgctgaagctgtctattattgacatgcttttcact
gtgggtagcatcttactcattgacttcattcgagggctgtttgtgcgattcctgagtgat
tgttggtgctgggatctagagagtaaatttcctgagtatggagaattcaagattgctgaa
aatgttttacatctgatatacaatcagggaatgatatggatgggcgctttcttctccccg
tgccttccagcgttcaatgttctcaaactgattggcctcatgtatttaaggagctgggca
gtcttgacctgtaatgttccacatcagcaggttttccgtgcttcaagatcaaacaatttc
tatctagctatgactctgttcatgcttttcttgtgtatgctaccaaccgtctttgctata
gcaagatatagaccctctccaagttgtggaccatttagtggtcaagataaaatttatgac
attgtgtcagagacaatagtcaatgatttccctgtctggtttaacactgtgatgagttat
gtcactagccctgtggtggctcttcctgcactgctgctgctttttatgttgatatattat
ctccaatcaattgcacgctcgctaaagtttaccaataatcagctcaggatgcagctccaa
gttgaaagaacagaggataaaaagaaagtattccagatggcagttgcgcgattccaacat
ttggaggatggcgacaagaaaacggaacgtgagagtgaggtggacagccaggaatccttg
attcaatcatcacctcggaggaatgggagtgttgcaaatgttgactccccagtcagtgca
gggagtcacattctgagtatttcacaacagctggctcatgcggatgtgcctcagattccc
agcctcactcatactccaactgcagcagcttcacgacacaagcgtgagcatgccttcccg
aggaatccaggtggattacagggagccgcaagtgggcctcacagaggaaaattgtcctcc
agctgtgccaccaaattaccggaagatattcgtcctgatgccccttttaggaagtgtgtc
agaccactgcactactcgcctgcagaaggggctccgcagatgattctaggtcgcagggtg
cacacggcacgttacatattagtcaatgagcgtgagccgaggaagaggttaatgcgctca
gtcactcgactcccgaggcattacaaggtggacgagaccaggggggcagtggaaatgttg
ccaaggaatctgaaaaggtatgcgtttcacgcagggcacagaaccaacccacagctgcac
gtcagcgaagaggaggaggatgaggacgagctggagcgaggcacgtttagcaggtctcca
cgcccgcactcgctctccgatctccaccaacccactcgcttctacatcggggacagcaaa
gacagccggatattggtcggcaaggacgtggcccagatccagtacgagtatgaggactct
gagccgcagcaggattgtgcaggccctgggtcatctcacgttcagtggaccagcaaaggt
ctggcacctagccagcaaggtgctggagctcccatcaaatggaaaacgaaacacaaagca
gagcagtcattgacggaatcggactctgcctcaatcgcatcgagcagtgaccagcagaac
agcagcaccgaccagtacattcaggtcattcacaccaaggataagtatttgaaaacttcc
aatgagaatctaagcaggagcaagtcaagagtaagcattgaactgaatgcggcagaggct
aatgaactgatctgttccaatgtctag
DBGET
integrated database retrieval system
