Rhincodon typus (whale shark): 109917358
Help
Entry
109917358 CDS
T06055
Symbol
poli
Name
(RefSeq) DNA polymerase iota
KO
K03510
DNA polymerase iota [EC:
2.7.7.7
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
109917358 (poli)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtp03400
]
109917358 (poli)
Enzymes [BR:
rtp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
109917358 (poli)
DNA repair and recombination proteins [BR:
rtp03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
109917358 (poli)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IMS
UBM
IMS_C
IMS_HHH_1
HHH
HHH_5
RecR_HhH
DNA_pol_lambd_f
Cdd1
IMS_HHH
Motif
Other DBs
NCBI-GeneID:
109917358
NCBI-ProteinID:
XP_048459959
LinkDB
All DBs
Position
1:32859887..32917777
Genome browser
AA seq
742 aa
AA seq
DB search
MEFSEYETAGDPHYSLQEEEEEEDEREWCCTVDDIDSSPVSPAVAAAASGEWTGNGNKYS
IQDTDISGFRVIVHIDLDCFYAQVEMIRNPELKGKPLAAGFLHIIALLMKKLTQHEASTT
VLLIQINVIAHYVHWVSHSNYLCSVLFVELLEEFSPFVERLGSDENFVDVSELVEKRLQQ
LGPGGVVPANVFVSGHVYGNRALNTADARHVRLALGSQIAAELRTAIFNRVGLTGAAGIA
PNKLLAKLVSGIFKPNQQTTLLPESIQDCMGSLVHPVQVPGIGPKTARRLEYLGISSIHG
LQTFPLNVLEKYLGVYTAQRIHKLSFGEDDSCVVPRGPPQSLSDEDSFEKCSSLVKIKMK
IEELLISLLIRLHNDGRVPRTIRLTIRRSSASNKWFNRESRQCPVPNQLMQKLITGPCDT
VVPLVEILMKLFEKMVDTRSLFYVSLLSVCFAKLVQPTLSSPIKGSIGFYLTQKSPGKSD
LSQNGEARRQLLRQWRGSDDADSGESTTGPMESHQESICGMADHVADDHSSLTCSDSTLP
PGIDVDVFKELPANIQKEIIADASPSKSQLKYKSKTEQSTEKEMRKGTFLFRSLTEEQRK
LLVPPDTDCSPIGSSSDTPLLDVHSSIPDNPDPQPEQGAVNDSGASVQDCQPSGETLELG
NAECERLTLRNSGPIPSNVDPKVFSELPNELQNELLTDWKQQKTVPKRNVAKQASKVRPN
TGARLPKKTTKSNSILKYFNKN
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggagttcagtgaatatgagacagcaggcgaccctcactacagtttacaagaggaggag
gaggaggaggatgaacgagaatggtgttgtacggttgacgacattgacagtagccctgtg
tctcctgctgttgctgcagcagcaagcggtgaatggacaggtaatggcaacaaatattct
atccaagacacagatatctcaggattcagggtgattgtgcacattgatctggattgcttc
tacgctcaggtggagatgatccgaaaccctgaattgaaaggcaagcctttagctgcgggg
tttcttcatattattgcattgctgatgaagaaactcacgcagcatgaggccagcacaact
gtcctgctaatacagataaatgtcattgcacattatgtacactgggtatcccacagtaat
tatctctgttctgtcctgtttgtagaattattggaggagttcagtccgttcgtggagagg
ctgggctctgatgagaattttgttgatgttagtgaactggtggagaagagactgcagcag
ctaggacctggtggtgttgtcccagcaaatgtttttgtgtctggtcatgtgtatggtaac
cgagcattaaacactgctgatgcaagacacgtccggttggctctcggatcccaaatcgca
gcagaattgcgaacagcaatattcaacagggtaggccttacaggagctgcaggaattgca
cccaataaattattggccaaactggtatcaggaatattcaaaccgaaccaacaaacgaca
ttgcttccagaaagcattcaagactgcatgggaagcctcgtgcatcccgtacaagtgcct
gggattggtcctaaaactgccaggcggcttgagtatctcggaattagcagtattcatggg
ctgcagacattccctttgaatgtgctggagaagtacttgggagtgtacacagctcaacga
atccacaagctcagctttggcgaggatgactcctgtgtggttcctagaggaccaccccag
tccctcagtgatgaagattccttcgagaagtgctcctcattagttaaaattaaaatgaaa
attgaagagctgctgatcagtcttctaatcaggttacacaatgatggacgtgtaccacgg
accattcggctcacaattagacgatcttcagcttctaacaaatggtttaatcgggagagt
cggcagtgtcctgttccaaatcaattaatgcagaaacttatcacaggtccctgtgacacg
gtggttccactggttgaaatcctaatgaagttgtttgaaaagatggtggacacaaggtct
ctgttttatgtaagccttctgagtgtgtgctttgccaagcttgttcagcccactttgtct
tcccccatcaagggatcaataggattctatttgacccagaaatccccgggaaaatcagac
ttgagccaaaatggggaagcacgtagacagctactcagacagtggagaggttctgatgat
gctgattcaggagaaagtactacaggtcccatggaaagtcaccaagaatctatatgtgga
atggcagaccatgttgctgatgatcactcaagtctgacatgctcagactctaccctacca
cctgggattgacgttgacgtatttaaagaactcccagctaatattcagaaagaaattatt
gcagatgccagcccttcaaaaagtcagctgaaatacaaaagtaagacagagcagtctaca
gagaaagaaatgagaaaaggcaccttcctgtttaggtcactaacagaagaacagaggaaa
cttctggtaccaccagacactgactgtagtcctatcggttctagttcagatacacctctt
ttagatgttcacagcagtataccggataatcctgatcctcagccagagcagggtgctgtt
aatgacagtggagcctctgtgcaagactgccaaccctctggtgaaaccttggaattgggt
aatgcggaatgtgagaggctcacgcttcggaactcaggacccatcccctctaatgtggat
ccaaaggtgttttctgaactgcccaatgagcttcagaacgaactgctgacagactggaaa
caacagaagacagtgccgaagagaaacgttgctaaacaggccagcaaagtaagacccaat
acaggagctagactccccaaaaagactaccaagtccaacagcatcctgaagtattttaac
aagaattaa
DBGET
integrated database retrieval system
