Rhincodon typus (whale shark): 109917392
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Entry
109917392 CDS
T06055
Name
(RefSeq) Fc receptor-like protein 5 isoform X1
KO
K06471
platelet/endothelial cell adhesion molecule
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04148
Efferocytosis
rtp04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
109917392
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
109917392
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
rtp04090
]
109917392
00536 Glycosaminoglycan binding proteins [BR:
rtp00536
]
109917392
04091 Lectins [BR:
rtp04091
]
109917392
CD molecules [BR:
rtp04090
]
Proteins
109917392
Glycosaminoglycan binding proteins [BR:
rtp00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
109917392
Lectins [BR:
rtp04091
]
I-type lectins (Siglecs)
109917392
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
Ig_2
Ig_C17orf99
ig
I-set
V-set
Zwei_Ig_N
Ig_VEGFR-1-like_5th
DUF5873
Motif
Other DBs
NCBI-GeneID:
109917392
NCBI-ProteinID:
XP_048466921
LinkDB
All DBs
Position
23:complement(6689265..6795587)
Genome browser
AA seq
785 aa
AA seq
DB search
MLKVIFPILSLVLLETSETESQNDLTINSVKLKHNLEDVGDIKEGSNITLTCSVDILTAS
GQPPHISYLIYKGQKDVLLKRDTIEAQEFQYVIQSARPSHSGYYHCEVTTGSQREESTSL
FITVTGNLQTPVLTIQPMEVVLGDSTELCCTSEEIPPLRFIFYRYKNGPNPQRLHDTTSN
NKSATHRLKVTADAEKNYSCTVEVSATRSISKHSEIVQLTVHSPFSDQVFEIKPSNEIFE
GDNLTTECRVTPLFPHVKLQLIIMKDTTPIRIGNTSSVVFSKTVNAADTGKYGCMVKWKS
LSQTIKRQVTVAVPVSVPTLMSTPTDGNVVKDGFLNLSCAVLGGSYPITYKFYQDTSENP
LHQITLNATKAVHHIVSVKIGHSGKYSCEASNSADHITRTERSQYVIITVKVPVSSPTIK
CSSLKDVYKTGEWVILLCHSTSGTVPITYSLFSNKRFIYSISRSNTEPAAFKVLLNETKD
GGEYKCKAENEIPNLFKYSKGINITVKVPVSKPLIYPLLNSTEVQLGETVTLHCITSAGT
LPITYTLYRNQSSLQSATTMQAIPAGFNITVHSMEHSGVYSCKAENQISSERSNGLSFHI
LCTQWWIYITIVLFSLVIIGLAILIARFRKLCSKNNEGISQEDESCKQGQSGPFQHNQGS
LKKTKEVIYSKIGNFTHRKLNQPDSDMLIEQQETDSDRNHEGDYTNIMSYERNVTEDDPE
SDCEADYTNVISKRKSSASADSDSSCDENNQVLYTQLDLAVLQNNNMPQPQGPTIYASIA
LDKLR
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaagtcatctttccaattctgtctttggtactacttgaaaccagtgaaacagag
tcacaaaatgatttgacaataaacagcgtaaaactaaaacataatcttgaagatgttgga
gatattaaagaaggaagcaacattactctgacttgttcagtggatatcctgacagcttct
ggtcaaccacctcatatttcatatttaatctataagggacagaaagatgtcctattgaaa
cgtgatacaattgaggcgcaagaatttcaatatgtaatacaatctgctcgaccctcacat
tctggatactaccattgtgaagtgacaacaggaagtcaaagggaagaaagtacttccttg
tttattacagttacaggaaatttacagacacctgtactcactatacaaccgatggaggtg
gttctgggagattcgactgagctgtgctgtacatctgaagaaatccctcctcttagattc
atattctatagatataaaaatggaccaaacccccagcgtctccatgatactacaagcaat
aacaaatctgcaacacaccgactgaaggtgacagcagatgcagagaaaaactatagttgt
acagtcgaagtgagtgctaccagaagtatctcaaagcacagtgaaatagtacaacttaca
gtacatagtccattttcagatcaagtatttgaaattaaaccgtcaaatgaaatatttgaa
ggagataatctcaccactgaatgcagggttacgcctttgtttcctcatgtaaaacttcaa
ctaatcattatgaaggatacaactccaatacgcataggaaatactagctcagtggtattt
tctaaaacagtaaatgcagctgatacaggaaaatatgggtgcatggtgaaatggaagagt
ttatctcaaactataaaaagacaagtgactgtggcagtaccagtttccgtaccaacttta
atgtcaacacccactgacggtaatgtggttaaagatggctttttgaatctttcatgtgct
gtgttgggcggatcttatccaataacttacaagttttaccaagatacatcagaaaatcct
ctgcatcaaataacgttaaatgctaccaaagcagtccatcatattgtttcggttaagatt
ggacacagtggaaagtattcctgtgaggcatcaaattctgcagatcatatcactcgaaca
gaaagaagtcagtatgttatcataactgtaaaagttccagtatccagcccaacaataaaa
tgcagctctttaaaagatgtatataaaacaggagaatgggtaatcctgctctgccactca
accagtgggaccgttcctataacttattcattgttctcaaataaaagattcatctactcg
atctcaagatctaatacagagcctgcagcttttaaagttctcttaaatgaaaccaaagat
ggcggggagtacaagtgcaaagctgagaatgaaattccaaacttgttcaaatacagcaaa
ggaataaacattacagtaaaagttcctgtatccaaaccactgatttatcctctgttgaat
tctaccgaggtgcagttaggagagactgtgacactgcactgcataacaagcgcaggaact
ctaccaatcacttacacactgtatcggaatcaatcaagtctccaatcagctactacaatg
caggcaattccagcaggctttaacataacagtacactcaatggagcattctggagtatac
agctgtaaagctgaaaatcaaatttcttcagaacgcagtaatggattatcatttcatatt
ttatgtactcaatggtggatatacataacaatagtcttattttcactagtgataatagga
ctggcaatattaatagctcgatttcgtaagctgtgctccaagaataatgaaggtataagc
caagaggatgaaagctgtaaacaaggtcagagtgggccttttcaacataatcaaggatct
ctgaaaaagacgaaggaggtcatttatagcaaaattggaaactttacacaccgaaagctc
aaccaaccagattctgacatgctgatagaacagcaagaaactgattcagacagaaatcat
gagggggactatacaaacatcatgtcatacgaaagaaatgttacagaagatgatcctgaa
agtgattgcgaagcagattacaccaatgtgatatcgaaaagaaaaagttctgccagtgct
gacagcgattcctcctgtgatgaaaacaatcaggttttatacactcaacttgatttagca
gttctgcagaataacaatatgccacagccacaaggacctacaatatatgcttctattgct
ttagataagttacgatga
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