Rhincodon typus (whale shark): 109917408
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Entry
109917408 CDS
T06055
Symbol
arnt2
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator 2
KO
K15589
aryl hydrocarbon receptor nuclear translocator 2
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109917408 (arnt2)
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
109917408 (arnt2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
PAS
HLH
PAS_9
PAS_4
Per3-like_PAS-A
PAS_2
bHLH_NCOA
Motif
Other DBs
NCBI-GeneID:
109917408
NCBI-ProteinID:
XP_048472019
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All DBs
Position
33:3125898..3473782
Genome browser
AA seq
719 aa
AA seq
DB search
MAAEMSSEVPEPVALTAPNNPVTPGPGQVRVIGAVPARGGKRRSGLEFDDEDGEGPSKFS
RENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRGTGNTST
DGAYKPSFLTEKELKHLILEAADGFLFVAAAETGRIIYVSDSVTPVLNHPQSEWFGSTLY
DQVHPDDVEKLREQLSTSESSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRSFICRMRCG
TAPLEHISLSRLTVLRKRYRNGLGPVKEGESQYSVVHCTGYIKAWPPAGMTLPEEESDGG
QSSKFCLVAIGRLQVTSSPVCMDMNGLAIPTEFLSRHNSDGLFTFVDHRCITVIGYQPQE
LLGKDIVEYCHPEDQSHVRDSFQQVVKLKGQVLSVMYRFRTKSRDWLWIRTSSFTFQNPY
SDEIEYIICTNTNVKQLQQQQQAELEVGPREGLPSYDPSQVPVATVSAGVQEHGKSIDKT
DPLFSQDRDPRFTDIYTGISPGEKKTMSTASAAGSQQIYSQGGSFQPGRTGQTFSTSMVP
GGNIIQQTSSAGQILAQISRQSNANQVSATSWTGSRPPFPGQQVTSQTGKAQSPPFAIGS
SHTFPADPSTFSPLSSPVSTSSPGGPSYTSLANRSTGFAESGQSSGQFQGRSSEGSAVWS
QWQGQHHNQQASEQHTHQQPGQPEVFQDMLSMLGDPTQGTGNYNNEDFADLSMFPSFSE
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgagatgagctctgaggttcccgaaccggtggctctgacagcaccgaataac
ccagtgacaccgggacccgggcaggtgagggtgatcggagcagtgcctgcccgtggaggg
aagcggcgctcgggactggaatttgatgatgaagatggagaagggcctagcaaattttca
agagagaaccacagtgaaattgagagacgacgtcgaaacaagatgacagcctacatcaca
gaattgtcagacatggtgccaacatgcagtgctttagcacgtaaacctgataaactgact
attttacggatggctgtgtcacatatgaagtctttaaggggaacaggaaatacttccact
gatggtgcctataagccttcattcctaacagaaaaggagttgaagcatttgattttggag
gcagcagatggattcctttttgtagctgcagctgagactggaagaatcatctatgtttca
gactctgttacgcctgttttaaatcatccacaatctgaatggtttggaagtaccttgtat
gatcaggttcatccagatgatgtggagaaactgagagagcagctgtctacatcagaaagt
tccatgactggccgtatactggatctcaagactgggacagttaaaaaagaagggcagcag
tcttcaatgagaatgtgcatgggttccagacgttcctttatttgtagaatgaggtgtgga
acagctcccttggaacatatctcattgagcaggctgactgttctacgcaagagatataga
aatggcttgggacctgtcaaggaaggagagtcgcagtattcagttgttcactgcactgga
tacatcaaagcttggccaccagcaggaatgacccttccagaggaggaatcagatggcgga
caaagcagtaaattttgtcttgttgcaattggacgccttcaggtaaccagctcgccagtg
tgcatggatatgaatggtctcgccattcccacagaattcctgtctaggcacaattcagat
ggactgtttacattcgtggatcatagatgcatcactgttattggctatcagccacaggag
ctactgggaaaggatattgtcgagtattgccatcccgaagatcaaagccacgtgcgagac
agttttcagcaggtcgtgaaattgaaagggcaggtgctgtcagtgatgtaccgtttccga
accaaaagcagagattggctatggataaggacaagcagttttactttccaaaatccctat
tcagatgaaattgaatatattatctgcaccaacaccaatgtaaagcaactccagcagcag
caacaagctgagcttgaagtgggtccaagagaaggtctaccttcctatgacccttcccag
gtgcccgttgcaactgtatctgccggtgtccaagaacatgggaagtcaattgacaaaact
gacccactgttttcgcaggatagagaccccagattcacagatatctacactggtatttca
cctggtgaaaagaagacaatgtccacagcatcagctgcaggaagccaacagatctactca
caaggaggttcattccagcctgggcgaacgggacaaacgttcagcacgtcaatggtacct
ggtggaaacatcattcagcaaacatcctcagcaggccagattttagcccagatatctcgc
caatcaaatgcgaaccaggtctctgcaacatcctggactgggagtcgaccacctttcccg
gggcagcaagtaacatctcaaaccggtaaggctcagtcaccacctttcgccataggatca
agtcacacattcccagcagacccatctactttcagtcccctgtccagtcctgtgtctaca
tcttcaccgggaggaccttcttataccagtctggcaaatcgatccactggttttgctgag
agtggacagagtagtggacagttccagggaagatcatctgaaggctcagctgtatggtct
cagtggcaaggccaacatcacaatcaacaggcaagtgagcagcatacacaccaacagcca
ggacaaccagaggtttttcaggatatgttgtccatgcttggagatccaacacaggggact
ggcaattacaacaatgaggactttgccgatctaagcatgttcccatcattttctgagtaa
DBGET
integrated database retrieval system
