Rhincodon typus (whale shark): 109917499
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Entry
109917499 CDS
T06055
Name
(RefSeq) E3 ubiquitin-protein ligase RING2-B-like isoform X1
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
109917499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtp04121
]
109917499
03036 Chromosome and associated proteins [BR:
rtp03036
]
109917499
Enzymes [BR:
rtp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109917499
Ubiquitin system [BR:
rtp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109917499
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
109917499
Noncanonical PRC1 (PRC1.1)
109917499
Noncanonical PRC1 (PRC1.3/1.5)
109917499
Noncanonical PRC1 (PRC1.6)
109917499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-Nse
zf-C3HC4_4
zf-RING_6
zf-RING_5
RING_XB3-XBAT31
zf-RING_4
zf-rbx1
zf-UDP
TRAF3_RING
zf-C3HC4_5
Sina_RING
DUF3668
zf-ANAPC11
Lar_restr_allev
Motif
Other DBs
NCBI-GeneID:
109917499
NCBI-ProteinID:
XP_020372923
LinkDB
All DBs
Position
35:8802004..8838977
Genome browser
AA seq
356 aa
AA seq
DB search
MAAPVNTQNPSKTWELSLYELHRTPQVSKTGQLSLYELQRTPQEAIMDGTEIAVSPRSLH
SELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNF
DALICKIYPSRDEYEAHQDRVLARLSRLHNQQALSSSIEEGLKMQAMHRAQRVRKAQHES
DNTTFSGGEDNCDSRSHVSNVSTHSNQEAGPSRKRSKASDDSCPDLDNSREGAGSPDVGV
DSCSEIELVFRPHPVLVEKDEYSQTRYVKTTANATVDHLSKYLALRIALEEQQKSIGNNA
VSLEEVSEKQYTIYITTSGGQFTTLNGSLTLELVNEKYWKVSKPLELYYAPTKEQK
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaccggtgaatactcagaatcctagtaaaacctgggagctcagtctctatgaa
ctgcaccggaccccacaggtgagtaaaacagggcagctcagcctctacgaactgcaaagg
accccgcaggaggcaattatggatgggaccgagattgcagtgtcgccccggagcttgcat
agtgaactgatgtgtcccatctgtctggacatgttaaagaacaccatgacaacaaaggag
tgtttacaccgcttctgctcggactgtattgtcaccgcactccgcagcggaaacaaagaa
tgtcccacgtgtcgaaagaagctggtgtctaaacgatctctccgaccagatcctaatttt
gatgcgttgatctgtaagatctatccaagcagggatgagtacgaagcacatcaagaccgt
gtgctcgcacgattgagcaggctccataaccaacaggctctaagtagtagcattgaggaa
gggctgaaaatgcaggccatgcacagagctcagcgagtaaggaaggcacagcacgaatca
gacaatactactttcagtggtggggaagacaactgtgacagccgctctcacgttagcaac
gtgtctacgcacagcaatcaggaggctggtccaagccgcaaacgctctaaagcttcagat
gactcttgtcctgatctggataactcacgggaaggggcaggaagtccagatgtcggggtg
gactcttgcagtgaaatcgagctggtgttccgacctcacccagtacttgtggaaaaagat
gaatattcacaaacaagatatgtgaagactactgcaaatgccactgtggaccatttgtct
aagtaccttgcattaagaattgctttggaggagcagcagaagagcattgggaataatgct
gtcagtctggaggaagtcagtgagaaacagtacacgatctacatcaccacctcggggggc
cagttcacgactttgaatggatcgctgacactggaattggtaaatgagaaatattggaag
gtcagcaagcctcttgagctatactacgcacccaccaaggagcagaaatag
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integrated database retrieval system
