Rhincodon typus (whale shark): 109917715
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Entry
109917715 CDS
T06055
Name
(RefSeq) protein Wnt-5b isoform X1
KO
K00444
wingless-type MMTV integration site family, member 5
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04150
mTOR signaling pathway
rtp04310
Wnt signaling pathway
rtp04916
Melanogenesis
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
109917715
04150 mTOR signaling pathway
109917715
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
109917715
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
rtp00536
]
109917715
Glycosaminoglycan binding proteins [BR:
rtp00536
]
Heparan sulfate / Heparin
Morphogens
109917715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
wnt
DUF6973
Motif
Other DBs
NCBI-GeneID:
109917715
NCBI-ProteinID:
XP_048463375
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Position
18:20054485..20175342
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AA seq
407 aa
AA seq
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MSRSTTSSEQLRDFIKLHTGGFVRTPVTSNSVTVRGALDAALNPARLTMTGLHVLLAAAF
LSGSSHCLVQANSWWSLAMNPIQRPEMYIIGAQPLCSQLNGLSQGQRKLCQLYQDHMIYI
GEGAKTGIKECQYQFRQRRWNCSTVDNTSVFGRVMQIGSRETAFTYSISAAGVVNAISRA
CREGELSTCGCSRAARPKDLPRDWLWGGCGDNAEYGYRFAKEFVDAREREKNYLKGSVDH
ARTLMNLQNNEAGRRAVYNLADVACKCHGVSGSCSLKTCWLQLADFRKVGDLLKEKYDSA
AAMKINRKGKLELVNSRFNPPTADDLVYLDQSPDYCVKNKTTGSLGTTGRLCNKTSEGMD
GCELMCCGRGYDQFKTTKVERCHCKFHWCCYVKCKKCTQIVDQFVCK
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgttccaccaccagctctgagcagctcagggatttcatcaaacttcacaccggg
ggctttgtgagaacacccgttacatctaactcagtgacagtgcgaggagcgctcgatgca
gctcttaacccggccaggctcaccatgactgggcttcacgttctgttggctgccgctttc
ctctctggctcttcccactgcctggttcaggcaaactcttggtggtcgctggccatgaac
cccatccaacggcctgagatgtacattataggcgcccaacctctgtgcagtcaactgaat
ggtctgtcgcaaggccagaggaagttgtgccagttatatcaggatcatatgatttatatt
ggagagggggcaaagacgggcattaaggaatgccagtatcagttcagacagaggcggtgg
aactgcagcactgtggataacacctctgtgtttggaagggtcatgcagatagggagccga
gagactgccttcacatattccatctcagcagctggtgtagtaaatgcaataagtcgtgca
tgtcgtgagggcgagctctcaacctgtgggtgcagtcgcgctgccagacccaaagatctt
ccccgggactggctgtggggaggttgtggggacaatgctgaatacggttacaggtttgcc
aaagaatttgtggatgccagggaaagggagaagaattacctaaaaggctcagtggatcat
gccaggacactaatgaacctgcagaataatgaagctggcaggagggctgtgtataatctt
gcggatgtggcatgcaagtgtcacggtgtttcaggctcctgcagcttgaagacttgctgg
cttcaactggctgatttccggaaagtgggtgatctgctgaaagaaaagtatgacagcgct
gctgccatgaaaattaaccgcaaagggaagctggagctagtaaatagccgcttcaaccct
cccactgcagatgatctagtttatctcgaccagagccctgattattgtgttaagaataag
accacaggctccctgggcacaacaggccgcctctgtaacaagacctctgagggaatggat
ggttgtgagctaatgtgctgcggacggggttatgatcagttcaagaccacgaaagttgaa
agatgccattgtaaattccattggtgctgttacgtcaaatgcaaaaaatgcacacaaata
gttgatcagtttgtttgcaaataa
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