Rhincodon typus (whale shark): 109917751
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Entry
109917751 CDS
T06055
Symbol
ctnna1
Name
(RefSeq) catenin alpha-1
KO
K05691
catenin alpha
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04520
Adherens junction
rtp05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
109917751 (ctnna1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
109917751 (ctnna1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rtp04812
]
109917751 (ctnna1)
Cytoskeleton proteins [BR:
rtp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
109917751 (ctnna1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
T7SS_ESX_EspC
PipB2_N
Motif
Other DBs
NCBI-GeneID:
109917751
NCBI-ProteinID:
XP_048459900
LinkDB
All DBs
Position
12:complement(18697016..18842853)
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AA seq
837 aa
AA seq
DB search
MTTINTQNISFKWDPKNLEIRTLAVERLLEPLVTQVTTLVNTSNRGPSNKKKGRSKKAHV
LAASVEQATQNFLEKGDKIAHESQYLKEELIAAVDDVRKQGEMMRSASSEFAEDPCSAMK
RGNMVRAARALLSAVTRLLILADMADVYKLLVQLKVVEETLVKVRNANNEQELGIQFKAL
KPEVDKLNLMAAKRQQELKDIHHRDQMAAARGVLQKNIPMLYTASQACLQHPDVAAYKAN
RDLIYKQLTQAVTGISNAAQATTSEDVILSQQSSAGELADALNRFDAGRKERGDALNAAI
DKMTKKTRDLRRQLRKAVMDHVSDSFLETNVPLLVLIEAAKNGNEKEVKEYAQVFRDHAS
KLVEVANLACSISNNEEGVKLVRMAATQLEGLCPQVINAALALAAKPQSKVAQDNMDLFK
ELWEKQVRVLTDAVDDITSIDDFLCVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGR
AARVVHVVTSEMDNYEPGVYTEKVLEATKLLSDTVMPRFTEQVEAAVEALSANPAQQLDE
NEFIDASRLVYDGIRDIRKAVLMIRTPEELDDSDFETEDFDVQSRTSIQTQEDQLINGQS
ARAIMAQLPQEQKAKIAEQVASFEEEKIKLDAEVSKWDDSGNDIIVLAKQMCMIMMEMTD
FTRGKGPLKNTSDVISAAKKIAEAGSRMDKLGRTIADHCPDSSCKQDLLAYLQRIALYCH
QLNICSKVKAEVQNLGGELIVSGVDSAMSLIQAAKNLMNAVVQTVKASYVASTKYQKSLG
MASLNMPAVSWKMRAPEKKPLVKREKNDDIHKVKRASQKKHVSPVQALSEFKAMDSI
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaatcaacactcagaatattagcttcaaatgggatccgaaaaatctagaaata
aggactttggcagtggaacgtctgttggaacctttggttacacaggtgactacccttgtt
aacaccagcaatagagggccgtctaacaaaaagaaaggacgctctaaaaaagctcatgtt
ttggctgcttctgtggaacaggcaacacagaatttcttggagaaaggtgataaaattgct
catgagagccagtacctgaaggaagaactaatagcagctgtggacgatgtacgtaaacaa
ggtgaaatgatgagaagtgcttcatcagaatttgcagaggatccttgctcagctatgaag
cgaggcaatatggttcgagctgcacgagcattgctgtctgctgttactcgccttcttatc
ctggctgacatggcagatgtttacaaacttcttgtacaattgaaagtagttgaagaaact
cttgtaaaggtgaggaatgccaacaatgagcaagaacttggaatacagtttaaggcattg
aaacctgaagtggacaaactgaaccttatggcagccaaaagacagcaggaattgaaagat
attcatcatagagatcaaatggctgcagcacgaggagttttgcagaagaatatccctatg
ctgtacactgcttcacaggcttgtcttcagcacccagatgtggctgcttacaaagccaat
cgagatttgatctataagcaattgacacaggcagttaccggcatttcaaatgcagctcag
gcaactacttcagaagatgtcattcttagtcaacaaagtagtgctggtgagctggcagat
gcgttgaatcgctttgatgctggtcgaaaagaaaggggtgacgcactcaatgctgcaatt
gacaaaatgactaaaaagacgagagacttgcgcagacagctgaggaaagctgtcatggac
catgtatcagattctttcttggagaccaatgttccccttctggttttgattgaggcagcc
aagaatggcaatgaaaaagaagtgaaagagtacgcccaagtatttcgtgaccatgccagc
aaattggttgaagttgccaatcttgcttgctctatttccaacaatgaagaaggtgtgaaa
ctagttcgcatggcagccacccagctagaaggcctttgcccacaggtcataaatgctgct
ttggccctggctgctaaaccgcagagtaaagtggctcaggataacatggatctctttaaa
gaattatgggagaaacaagtgcgtgtgctgacagatgctgtggatgacattacttctatt
gatgacttcctgtgtgtttcagaaaatcacatccttgaagatgtaaataaatgtgttatc
gcactccaggaaaaagatgtagatggactagaccgtacagctggtgcaatcagaggacgt
gctgcaagagttgtccatgttgtcacatcagagatggacaattatgaacctggggtgtac
accgaaaaagttctggaagcaaccaagttgctgtctgatacggttatgcctagatttact
gaacaagtggaagctgctgtggaagcactgagtgccaatcctgctcaacagttagatgaa
aatgagttcattgatgcttcacgattggtatatgatggcattcgggacattaggaaagct
gtattgatgattagaactcctgaagaattggatgactctgattttgaaactgaagacttt
gatgtgcagagtagaactagtatccagacccaggaagatcaacttattaatggacaaagt
gcaagggccattatggctcagcttccacaagaacaaaaagcaaagattgcagagcaggta
gccagttttgaggaggagaagatcaaactggatgctgaagtttctaaatgggatgacagt
ggaaatgatataattgtcctagccaagcagatgtgcatgattatgatggagatgacagat
ttcaccagaggaaaaggtccactgaagaatacatctgatgtaatcagtgcagccaaaaaa
attgctgaagctggatcaagaatggataaacttggacgaactatcgctgatcattgtcca
gactccagctgtaagcaagacttattggcctatctgcagcgtattgccttgtattgtcat
cagctgaacatctgcagcaaagtaaaggcagaagtccaaaacctgggtggtgagctcatt
gtatctggagtggatagtgcaatgtctttgatccaagctgcaaagaacttgatgaatgct
gttgtgcaaaccgtgaaggcctcctacgtggcatccacaaagtatcagaaatctctgggc
atggcatctttgaacatgcctgctgtctcatggaagatgagggctccagaaaagaaaccc
ttggtaaagagggagaaaaatgatgatattcacaaagttaaaagagcatctcagaaaaag
catgtctcaccagtgcaggctctcagtgaattcaaggcaatggatagtatttaa
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