Rhincodon typus (whale shark): 109917812
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Entry
109917812 CDS
T06055
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
109917812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtp04121
]
109917812
Enzymes [BR:
rtp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109917812
Ubiquitin system [BR:
rtp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109917812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
Zn_ribbon_IFT122_C
SID-1_RNA_chan
IL4_i_Ig
Motif
Other DBs
NCBI-GeneID:
109917812
NCBI-ProteinID:
XP_048468334
LinkDB
All DBs
Position
26:30807586..30850882
Genome browser
AA seq
800 aa
AA seq
DB search
MPEMEPDGTNDNPTLPSFHPLWLCNTSEDEQQDYGFVSMVKLERPDRDPHPCLSLFNKAK
FAIQRGATAVIFDVTDDASAVGQLKQNQEDLLPRPVILIQGRDATQLMKVINTNGEAVVR
IHVKSDRLGRPAYDVGILMTLIVAFSVVVMILAVRIKCKQNRTRNSLQQQTINAISQLAT
RRYQSRRQSQSHEHQNSLDTQSSNVSEPVCAICLEEFADGQDLRIISCFHEFHKECVDPW
LLQHRTCPLCMYNIIEGNSSIPQQEAHNRANPAAQLNQHIHLLRHYPGHAHLHRPNTAIP
SRPPRLNNPRTPGMQIAPPDHYFVTPEVYRAGFNAVRYVASRPQQSSNSHRCNYRHADGQ
RVFYRHQRPITVRKGPPWPDQVLHHRCLHKPPCWPQQLSACNAPPSSHHSKPNCTPDHSQ
ITSNHDNHSFSGDSFGINCSVKSGYLADSPGSDSSSGPCHCSSSDSTLDCTDISNQCTYG
SQSTFRSSLSSEYDPLVYCGVGGETMKSSSFEVQRPRSMDSVNGPLEDHAFSHTHYHHHR
HHHYGDADPSPEGAQCMNPGWSSAEKRENKQLEEFMNDNVHCQPEAEFSCQSQYTAHSVQ
CPYMGQHLLLSPGLCLPETSLQTMDGKKRKSEVVCAKPDQVPSENKSNRSSNRRRRRRRK
RNFQMDQPIVYFHQDCDTLEDCRVHIHYGNHGRQCHLPNVQPSVPIPLILNNGASNEWSF
PFCECPSSLCQQRLCQVGSEPQLAEEQYMNNNEPRHTFQETYTEGYRDGVQLQDESFHCQ
TIPNNPGSESNVEEICEEAV
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaatggagcctgatggtacaaatgacaacccaactctgccttcatttcaccct
ctgtggctgtgtaacaccagtgaagatgagcagcaagactatggctttgtcagcatggtc
aaattggagcgccctgaccgagacccacatccctgtctctccctcttcaacaaggccaag
tttgctattcagagaggtgccacagcagtgatttttgatgtaacagatgatgcaagtgct
gtgggtcagctgaaacagaatcaagaggatcttttgcctcgtccagttatcctgatccaa
ggccgggatgctacccagctgatgaaggtcatcaacaccaatggcgaagcagtggtcagg
attcatgtcaagagtgacagactgggtcggcccgcctacgatgtggggatcctcatgacc
ctgattgtggctttctcagtagttgtcatgatcctggcggtgcgaatcaagtgcaagcag
aaccggactcggaattccttgcagcagcagactatcaatgcgattagccaactcgccacc
agacgttatcaatcacggcgtcagtctcagagtcacgagcatcagaacagcttggataca
cagagtagcaatgtttcagagccagtctgtgctatctgcctggaggagtttgctgatggg
caggatctacggataatttcttgtttccatgaatttcacaaggaatgtgtggatccctgg
cttcttcagcatcgcacctgccctctctgcatgtacaacattattgaaggtaattcttca
attccacaacaggaagctcacaatcgagccaatccagctgctcaactaaatcagcatatc
catttgctgaggcattaccctggccatgcacaccttcacaggccaaacactgccattcct
tccaggcctcctcgcttgaacaatcccagaactccaggaatgcaaattgctccccctgac
cattactttgttactccagaagtctatcgtgcaggatttaatgccgtgagatatgtggcc
tcaaggccgcaacaatcttcaaactcacataggtgcaactatcgtcatgctgatggccaa
agagttttctacagacaccagagacccattactgtacgaaaaggcccaccatggccggac
caagttcttcatcaccgatgtctgcataaacctccctgctggccgcagcaactttcagca
tgcaatgccccaccatcttcacatcattcgaagcctaactgtactcctgatcattcgcag
atcaccagcaaccatgacaaccacagcttctcaggggacagttttggtattaactgttca
gtgaaaagtggatacctggcagacagcccaggtagtgattccagctcaggtccttgccac
tgctcctccagtgattcaacactggactgcacagacatcagcaaccagtgtacttatggg
agccaatcaactttccgcagctctctgagcagtgagtatgatccccttgtatactgtggg
gtgggtggggaaactatgaagagttcatcctttgaagtacagagacccaggtccatggac
tcagttaatggtcctctggaagaccatgcgtttagccacactcactaccaccatcatcgg
caccatcactatggcgatgctgacccaagtcctgaaggagcgcaatgtatgaaccctggc
tggagctcagcagagaagcgggaaaacaaacagttggaggagttcatgaatgataatgta
cactgccagcctgaggcagagttcagctgccaatcccagtacactgctcattctgtccag
tgcccctacatggggcagcacctattactttcccctggactttgccttcctgaaacatcc
ctgcaaactatggatgggaaaaagagaaagagtgaggtagtttgtgccaaaccagatcaa
gtgccttcagaaaataaatccaatcggagcagcaacaggaggaggcgaaggaggaggaaa
agaaatttccaaatggatcagccaatagtttacttccatcaggactgtgatactctggag
gactgtagagtacatattcattatgggaaccatgggaggcagtgccatcttccaaatgtt
cagccatcggtgccaatccctttaatccttaacaatggagcctctaatgaatggagtttc
ccattttgtgagtgtcctagctccctctgtcagcaacgactgtgtcaggttggttctgag
ccacagctggcagaagagcagtacatgaacaacaatgagccacgacacacatttcaagag
acctatactgaaggatatcgtgatggagtacaattacaagacgagtccttccactgccag
acaatccctaacaatccaggttcagaatcaaatgtggaagagatctgtgaagaagctgtg
tag
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