Rhincodon typus (whale shark): 109917835
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Entry
109917835 CDS
T06055
Symbol
gdf6a
Name
(RefSeq) growth/differentiation factor 6-A
KO
K20012
growth differentiation factor 6
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04060
Cytokine-cytokine receptor interaction
rtp04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
109917835 (gdf6a)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
109917835 (gdf6a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
rtp04052
]
109917835 (gdf6a)
Cytokines and neuropeptides [BR:
rtp04052
]
Cytokines
Transforming growth factors (RSTK binding)
109917835 (gdf6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
109917835
NCBI-ProteinID:
XP_020373282
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Position
4:complement(87179665..87190988)
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AA seq
422 aa
AA seq
DB search
MEALRAAALLLCSVTCCCWWDLQGVEPAALSPAPSSSSPGTGLGGGGPGPHTDARARKLL
LMKESGPPSARGRRRRRAHSVIPHHFMMSIYTAHSAAERLGINASLLRAARSAANTITGF
VDRAEDDVLHSHLRRQKYLFDVAALSNKEELVGAELRLLRKTPEQFRQTLSGLYDFKLYS
CLSEGQPSKLLQSRTLHIHQSNAQGWEVFDVWEIFQFFHSAQLCFELKVTSSQSERDIDL
RQIGFARKGRTPQERALLVVFTRTRKRENLFSEMKEKIKSSEGSADEEGERQFKARRRRR
RRTAFTNRHGKRHGKKAKSRCSKKPLHVNFKELGWDDWIIAPLDYEAYHCEGVCDFPLRS
HLEPTNHAIIQTLMNSMDPNSTPPSCCVPTKLSPISILYIDAGNNVVYKQYEDMVVESCG
CR
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgctccgagccgctgctctgctcctctgctcggtcacctgttgctgctggtgg
gatttacagggcgtggagcctgcagcgctgtccccggctcccagctcctcctccccgggg
accgggctcggcggcggcggccccgggccccacacggatgccagggcgaggaaactgcta
ctgatgaaggagagcggtccgccctctgcccggggccgccgccgccgccgagctcacagc
gtgatccctcaccacttcatgatgtccatctacactgctcactcggcagccgagagactc
ggaatcaacgccagcctcctccgagccgccaggtccgcagctaacaccatcaccggcttc
gtggatagagccgaagacgatgtcttgcattcacatttaaggcggcaaaaatacttgttc
gatgtcgcagcgttgtcgaacaaagaggaattagtcggggccgaattgaggttactgaga
aaaacgccggagcaatttcgacagacactgtctggtctctacgacttcaaactgtactcc
tgcctcagcgagggacaaccgtccaaattactgcagtcccgcacgcttcacattcaccag
tccaatgcacaaggatgggaggtatttgatgtctgggaaatatttcagtttttccactct
gcccagttatgttttgaattgaaggtgacatccagccagagcgaacgggatattgacctg
agacaaatcgggttcgcacggaaggggagaacgccccaagaaagagctctgctggtggtt
ttcactcgaactcggaaaagagagaatctcttcagcgagatgaaagagaagatcaaatcc
tcagagggctccgccgacgaggaaggcgaacgccagttcaaagccaggaggaggaggagg
agacgaaccgcctttacaaaccgccatgggaagaggcacggcaagaaggccaagtcccga
tgtagtaaaaaacctctccatgtgaacttcaaagagttgggttgggatgactggataata
gctcccttggactatgaagcttatcactgcgagggagtgtgtgacttcccgctcagatcc
cacctcgaacccaccaaccatgcgattatccaaacgctcatgaactctatggacccgaac
tccacgcctccgagttgctgcgtccccaccaaactgagccccatcagcatcctgtacatc
gatgcgggcaataatgttgtctataagcagtatgaggacatggtcgtagagtcatgcggc
tgcaggtag
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