Rhincodon typus (whale shark): 109917882
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Entry
109917882 CDS
T06055
Symbol
nup85
Name
(RefSeq) nuclear pore complex protein Nup85 isoform X2
KO
K14304
nuclear pore complex protein Nup85
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109917882 (nup85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtp03019
]
109917882 (nup85)
03036 Chromosome and associated proteins [BR:
rtp03036
]
109917882 (nup85)
Messenger RNA biogenesis [BR:
rtp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109917882 (nup85)
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
109917882 (nup85)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
DUF760
Motif
Other DBs
NCBI-GeneID:
109917882
NCBI-ProteinID:
XP_020373340
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All DBs
Position
23:29517933..29565232
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AA seq
658 aa
AA seq
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MEDSLREYEPFPMDIPGVDVGEFIGFEWGPTQMLLYPTRHDQTETAPDSSPRMPSIQVVY
SDKDVYSPILCKLFNESHGIFMTLQKSKHDCTTQRAELVSISRNYRSVIRAYLEELHRAA
RSAFSQDPSLSMQYEDQVSILSAMELIWNLCEILFIEAAQGGSLILHLLDWIRLHICQVD
AMSDQIMTSENPVEHLYYWNVVTGYVLQGRLEEARQLLSKKAVTEPANSSMYRCMDELMR
KMPFYTHSSNQTITEFELKWRYWQEECERCLKEGIFASNDNLLLICKILAGDENAVCDKK
DILSTWYHLLVSKLLYCHPTVKPTDLYQYAEICLNNFMSSGSKPEALDRILLAALEFNIH
QVLKDCCVILNNWWFVAHLTDLLDHCKLLQSHNLHFGSNLREFLILEYASGLFNHNSLWQ
LAVDYFDHCPQFGRIYLELYIERVPLTTERKALKVLRICEQRQMTEQVRSICKIMAMKAM
RNNRLGSALSWSVRAKDSFFATLISDRLLQDYSVKGSFSDFDLISNLGSSMLLSDRLTFL
GKYCEFHKLYGEMQFAKAANLLLSLMTARIAPRSFWMTLLLDALPMMEQKEVIFSTEQTY
ALMHCLEDVTADNTESEREMRALGGEDEVETTQLGLLRLAFTRNLAKAIVQEGTHQGS
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggaggattcacttcgggagtatgagccgttcccaatggatattccaggagtggatgtt
ggggagttcatcgggtttgaatggggccctactcaaatgttgctgtatccgacacggcat
gatcagacagagactgcaccagacagctccccaagaatgccctccattcaagttgtctac
agcgataaagatgtatactcaccaattctgtgtaaacttttcaacgagtcacatggcatc
ttcatgactcttcagaaatccaaacacgattgcacaacccagagagcggagttagtttct
attagcaggaactatcgttcagtgataagagcttatctggaggaactgcatagggccgca
agatcagctttttctcaggatccaagcttgtcaatgcagtatgaggatcaggtttcaatt
ctatctgcaatggagctaatctggaatctctgtgagatcctgttcattgaggcagctcaa
ggtggttccctcatattacatcttctggactggatcagactgcatatttgccaggtggat
gctatgtctgatcagatcatgacttctgaaaaccctgtggaacatctgtactactggaat
gtggttactggctatgtgctacaaggccgattggaggaggctcgacagttgctgtctaag
aaggctgtgactgaacctgcaaacagttcgatgtacagatgtatggatgaactgatgaga
aagatgcctttttacactcatagcagtaatcaaactataactgagtttgagttgaaatgg
cgttattggcaagaggaatgtgagcgatgcttgaaagagggaatttttgcatccaatgat
aacctgctgctaatttgcaagatcctagcaggtgatgagaatgcagtgtgtgacaagaag
gatatcttgtctacctggtaccacctactggtcagcaagctgttgtactgtcacccaact
gtaaaacctacagacctttatcaatatgctgagatctgtctaaataattttatgtcttct
gggagcaagcctgaggctctggaccgtatcctgttggcagcactcgaattcaacatccac
caggtgttgaaagactgctgcgtcattctgaataattggtggtttgtggctcatctgaca
gatctattggatcattgcaaacttctacaatcccataatcttcattttggctcaaacctt
cgtgaattcctcattctggaatatgcctctgggctcttcaaccacaatagcctctggcaa
ctcgctgtagattattttgaccactgtccacagtttggtcgcatttacctggaactttat
attgagcgtgtacctctgaccactgaacgcaaggcactaaaggtgttgagaatatgtgag
cagcgacagatgacggagcaagtgaggagcatctgtaagatcatggcgatgaaagcaatg
cgcaacaaccgactgggatcagctctttcatggagtgttcgagcaaaagattcattcttt
gcaaccctcatctcagataggttacttcaggattactccgttaaaggaagcttttctgac
tttgacttgatcagcaacctaggatcctctatgctgctgagtgaccggctgaccttcctt
gggaagtattgtgaatttcacaagctctatggggagatgcaatttgcaaaagctgctaac
ctactgctttcactgatgactgcccgcattgctccaagatctttctggatgacactactc
ttggatgctcttcccatgatggagcagaaagaggtgatcttttctacagagcagacgtat
gcactcatgcactgtctggaggatgtgacagctgataatactgaaagtgaaagagagatg
agagctttggggggtgaggatgaggtggagacaacacaactcggcctcctccgattggct
ttcactcggaatctggcaaaggccattgtgcaagagggaacgcatcaaggatcctga
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