Rhincodon typus (whale shark): 109917883
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Entry
109917883 CDS
T06055
Symbol
gga3b
Name
(RefSeq) ADP-ribosylation factor-binding protein GGA3
KO
K12404
ADP-ribosylation factor-binding protein GGA
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
109917883 (gga3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109917883 (gga3b)
Membrane trafficking [BR:
rtp04131
]
Endosome - Golgi transport
Others
GGA
109917883 (gga3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VHS
Alpha_adaptinC2
GAT
GGA_N-GAT
DUF2096_N
PCRF
DUF5694
DASH_Dad4
DUF885
HBM
RapA_C
Motif
Other DBs
NCBI-GeneID:
109917883
NCBI-ProteinID:
XP_048466779
LinkDB
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Position
23:complement(29567735..29595968)
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AA seq
720 aa
AA seq
DB search
MAEGESLESWLNKATNPANRQEDWEYIIGFCDQVNKELEGPQIAVRLLAHKIQSPQEWEA
VQTLTVLEACMKNCGRRFHNEVGKFRFLNELIKVVSPKYLGDRVSEKVKTKVIELLYSWT
VALPEEIKIKDAYQMLKKQGVLQHDPQIPVDKTLIPSPPTRPKNAVFEDNEKSKLLARLL
KSKNPVDLQEANKLIKNMVKEDEARMQKITKRLNTLEEVNNNVRLLNEMLAHYSKEESSE
GDKELMTELYERCEKMRRTLFKLASETEDNDNSLGEILQASDDLSRAINSYKKVVQGQAV
NGELDLPELTRPSVNSGATNTETLIDLAGLDVPSEKAYPTISPVFPIIPPPPQASNDPGS
RTASLSNVAKQPPSSVGLLDVELLSLGLNDPPSSSEIDKDSGESLWNNFQVEPSALNPFA
GPPAADGPVSSITPLLQSVPRTLNQSPAQCLLPFSGVSQAPRAAAVPLLMNAATIVPQSN
PVSVFPMPPLEPRIPGALLHSSSCSQTTFSSSMQELDMLGQKVLEEVKSASGMAGIVPGA
PAGSGYSTPSAAPSSPLFRSLSPQPSSPLRSAFPEMSLSNVTVPLETIKPSNVHPVTAYD
KNGFRILLHFAKDCPPARLDVLVIVISMISTSSLPITNVLLQAAVPKTMKVKLQPPSGTD
LAPFNPILPPASITQVMLLANPLKENVKLRYKLTFTMGQQLCSEMGEVDQFPPAEKWGCL
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggcggagggtgagagtctggaatcatggctcaataaagccactaatcctgcaaaccgt
caagaggattgggagtacatcatcggcttctgtgaccaggttaacaaggaactggagggg
ccacagattgctgtcaggttgctggctcataaaatccagtctcctcaggagtgggaggca
gtgcaaacccttacagtattagaagcttgtatgaagaactgtggcaggagatttcacaat
gaagttggaaaattccgattcctgaatgaattgatcaaagtagtatctccaaagtatttg
ggagacagggtatctgaaaaggtcaaaacaaaagtgattgaattactgtacagctggacg
gttgctctgccagaggaaatcaaaatcaaagatgcctaccagatgttaaagaaacaaggt
gtattgcaacatgatcctcagatcccagttgataagaccctgattccctcacccccaact
cgtccgaaaaatgcggtatttgaagataatgaaaaatctaagctcttagccaggttactg
aagagcaaaaacccagtggaccttcaagaagctaacaaactcattaagaatatggtgaaa
gaggatgaagcccgaatgcagaaaataacaaagcgtttgaacactctggaggaggtgaac
aataacgtacggcttttgaatgaaatgctggctcattacagcaaagaagaatcgtcagaa
ggggacaaagagctgatgacggagttgtacgaacgatgtgagaagatgagacggacattg
ttcaaacttgcaagtgagactgaggacaatgacaacagtttaggtgagattttacaagcc
agcgatgacctttcacgagcgataaactcctacaaaaaggtggttcaaggacaggctgta
aatggggagcttgacctgcctgaacttacaagaccatcagtgaatagtggagccactaac
acggagaccctaatcgatctggctggactggatgttccctcggaaaaggcttaccccacc
atctcgccagtattccccattattccacctccaccacaagcctccaatgatcctggctcc
cgaactgccagcctgtcaaacgtggccaagcaacctcccagttctgttggactgctggat
gtggagctgctttcactgggactgaatgaccctccatcaagttctgagattgacaaagac
tctggagagtctctgtggaacaactttcaggttgaaccctctgccctcaacccctttgca
gggccgccagctgctgatggaccagtttcctccatcactcctctgctgcagtctgtacct
cgaacattaaaccagtctccagctcagtgcctcctgccgttctctggggtatctcaagct
ccacgtgcagcagcagttcctttgcttatgaacgctgccaccattgtccctcagtctaac
ccagtctccgtgtttccgatgccaccactggagccccggattccaggtgctttgctccat
tccagctcctgttcccaaacgacattcagcagcagtatgcaggagctggatatgcttggt
cagaaggttctagaggaggtcaaaagtgcttctggtatggcggggattgtccctggggca
ccagcaggcagtgggtacagtacaccctctgcggcccccagcagtcccctgttccgctct
ctctcccctcagccatccagtcctctccgaagtgcttttccagaaatgtcactgagcaac
gtgacagttcctctggagacaattaaaccaagtaatgtccaccctgtgactgcgtatgac
aagaatggtttccggatcctcctgcactttgcgaaggactgtcctcctgcgagattggat
gtgcttgtgattgtcatctccatgatcagcacctcatccctgcccatcaccaatgtgctt
ctgcaggctgctgtacccaagacaatgaaagtgaagctgcaacctccatcgggaacagat
cttgctccattcaatcctatcctgcctccagcttctattacccaggttatgttactggca
aatcctctgaaggagaacgtcaaactgagatacaagctaacttttacaatgggacagcag
ttgtgctcagagatgggtgaggtggaccagttccccccagctgaaaaatggggatgtctt
tga
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