Rhincodon typus (whale shark): 109917898
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Entry
109917898 CDS
T06055
Symbol
tfap2a
Name
(RefSeq) transcription factor AP-2-alpha isoform X1
KO
K09176
transcription factor AP-2 alpha/beta
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109917898 (tfap2a)
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Other basic domains
AP-2 (bHSH)
109917898 (tfap2a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TF_AP-2
DUF2624
Motif
Other DBs
NCBI-GeneID:
109917898
NCBI-ProteinID:
XP_020373357
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All DBs
Position
4:41675327..41693506
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AA seq
501 aa
AA seq
DB search
MDQTTSDPGSGQQSPPDKELKRKRAESAGSRSPARKRVAADMPLAFAGFSHDNEVSLFFP
PDELRSDCPQMLVHSFSAMDRHDGTSNGTPRLPQLGTVSQSPYPTAPPLSHTPNTDFQPP
YFPPPYQPIYPQSQDPYSHVNDPYSLNSLHPQPQPQHPTWPQRQNQEAGILHQPRGLPQL
AGLDPRREYRRPEVLLHSTHGLDSGLGDTLPIHSIAHAIEDVQHVDDQGINIQDHTVIKK
GPMSLSKSHSGAVTSISLNKDGLFGGVANPNEVFCSVPGRLSLLSSTSKYKVTVAEVQRR
LSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAGRRKAANVTLLTSLVEGEA
VHLARDFGYVCETEFPAKAIAEYVNRQHSDPSEQVTRKNMLLATKQICKEFTDLLTQDRS
PLGNSRPAPILEPGIQSCLTHFSLITHGFGSPALCAAITALQNYLTEALKAMDKMYMNNT
PNNHTGENPSKSGDKDEKHRK
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggatcagactactagtgacccaggatcagggcagcagtcacctccggataaagagctg
aaaaggaagagagctgagagcgcaggtagtcgctctccagccaggaagcgagtggccgcg
gacatgcctttggcgtttgctggattctcacacgataacgaggtctctctattttttccc
cctgacgaactcagatcagactgcccgcagatgttagtgcacagtttctcggccatggac
cggcacgacggcacaagcaatgggactccacggttgcctcagttagggacggtcagccag
tctccgtacccgaccgccccgccgctctctcacactcccaacacggacttccagccaccc
tacttccctcctccgtaccagcccatctacccgcagtcgcaggacccctattcccatgtg
aacgacccttactcgctgaactcgctgcacccgcagccccagccgcagcacccgacctgg
cctcagcggcagaaccaggaagcgggaatcctccaccagccccgcgggctgccccaactc
gccggcctggacccgcggagggagtaccgacggcccgaggtcctcctccacagcacccac
ggactcgactccggcctcggggatacattgcctatccacagcatcgcacatgctatcgag
gatgtacagcatgttgatgaccaaggtattaacatccaggaccataccgtcattaagaaa
ggtcccatgtccctatctaagtctcacagtggggctgtcacctcgatctcactcaataag
gacgggctctttggcggggttgcgaacccgaacgaggtgttttgttcagttccgggtcgc
ctctccctcctcagttcaacatcaaagtacaaggtgacggtggcggaagtgcagagacgc
ctgtctccgcccgagtgtctcaacgcctcgttactgggaggagtgcttaggagggcgaaa
tctaaaaatggaggacgatctttaagagaaaaattagacaaaattggattaaatttaccg
gcaggcaggcgcaaagctgctaacgttacgctgctaacctcacttgttgagggtgaagct
gtgcaccttgcccgagattttggttatgtttgcgaaacagaattcccagccaaagcaata
gctgagtacgtcaaccggcaacattccgacccgagtgaacaagtgacacgaaaaaacatg
ttacttgcaacgaaacaaatctgcaaagagtttacagacttgctgactcaggaccgatct
cctttggggaattctcggccagccccgatcctggagcctggcattcagagctgcctcact
cacttcagcctcattacacatggcttcgggagcccggctctctgcgccgccatcaccgcc
ttgcagaactatcttaccgaagcactcaaagccatggacaaaatgtacatgaacaatact
cccaacaaccacacgggcgaaaaccccagtaaaagcggagacaaggacgagaagcacaga
aagtaa
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