Rhincodon typus (whale shark): 109917918 Help Entry 109917918         CDS       T06055                                  Name (RefSeq) host cell factor 1-like   KO K14966   host cell factor 1 Organism rtp  Rhincodon typus (whale shark) Pathway rtp03083   Polycomb repressive complex rtp04980   Cobalamin transport and metabolism rtp05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:rtp00001]  09120 Genetic Information Processing   09126 Chromosome    03083 Polycomb repressive complex     109917918  09150 Organismal Systems   09154 Digestive system    04980 Cobalamin transport and metabolism     109917918  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     109917918  09180 Brite Hierarchies   09181 Protein families: metabolism    01009 Protein phosphatases and associated proteins [BR:rtp01009]     109917918   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:rtp03036]     109917918    03029 Mitochondrial biogenesis [BR:rtp03029]     109917918 Protein phosphatases and associated proteins [BR:rtp01009]  Protein serine/threonine phosphatases   Phosphoprotein phosphatases (PPPs)    Protein phosphatase-1     PP1-interacting proteins (PIPs)      109917918 Chromosome and associated proteins [BR:rtp03036]  Eukaryotic type   Histone modification proteins    HAT complexes     NSL complex      109917918    HMT complexes     COMPASS/SET1 complex      109917918     MLL-HCF complex      109917918    Polycomb repressive complex (PRC) and associated proteins     PR-DUB complex      109917918 Mitochondrial biogenesis [BR:rtp03029]  Mitochondrial quality control factors   Regulator of mitochondrial biogenesis    Other regulator of mitochondrial biogenesis     109917918 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Kelch_HCF Kelch_KLHDC2_KLHL20_DRC7 Beta-prop_FBX42 Beta-prop_ATRN-LZTR1 Kelch_1 Kelch_2 fn3 Kelch_FKB95 Beta-prop_TYW4 NANM Motif Other DBs NCBI-GeneID:  109917918 NCBI-ProteinID:  XP_048462624 LinkDB All DBs Position 16:complement(3067687..3163582) Genome browser AA seq 1570 aa AA seqDB search MAAPILKWKRVTNSSGPVPRPRHGHRAVSIKELMVVFGGGNEGIVDELHVYNSATNQWFI PAVRGDIPAGCAAYGFVCDGTRLLVFGGMVEYGKYSNELYELQASRWEWKKLKAKAPKNG PPPCARLGHCFSVIDNKCYLFGGLANDSEDPKNNIPRYLNDLYILELKPGSGVVGWDIPV TYGTPPPPRESHTAVVYRNKDNKKPKLVIYGGMSGCRLGDLWILDIENLTWNKPEVAGVP PLPRSLHSATMIGSKMYVFGGWVPLVLEDVKAPTHEKEWKCTNTLACLDLETMTWTQIST ESFEDNIPRARAGHCSVSISTRLYVWSGRDGYRKAWNNQVCCKDLWYLETEKPPAPGKVQ LVRASTNSLEVSWGLVSTADSYLLQLQKYDVPTVTTAVTPLPTSAVTGIRPSCSPAPAAA SVSPSPVQSGVRFVTQTTPAVGTQAASLTTSATSPSVVQIPTAVASPRGPASPMIRATTG QPVVASAASTTPLITVQRQATPQGKTPISVAALPPGVRMVMPAQTTAGTPLTSSPQMSGM AALAAAAAATQKIPSSTAVTSVGLHPSTTVVKTMAIASGVSTLASTVKVATPSVMVNTPA TSMLKTAAAQLVTPTHAATSTASARPIITVHKSGTVTVAQQAQVVTTVVGGVTKTITLVK SPISMAGGSTLISNLGKVLTLQAKPGQQATISAPASTGPLTQIFQTKGQLPPGATILKLV TSADGKPATIITTSQAGNVGLKQTFVSLSNVSPASSKPATTILKTIPMSALISQPGTTGV TGSPGMKSPITIITTKVMTSGTGTPTKFITAVPKLQTGQQGLTQVLLKGAAGQPGTILRT LSGTPVTGVRLITPVTVSAAKPALTTLVVKGTTGASTLGTIAGTTLAGVSTVSPTLNTPI ATLGTIANLTGQIISASPNTTQKLTAVTGTTSTAPIITIQPVSEPNRVTIVASPGGMVAQ QAQQLVNSGSALVAAPQVATVNSETQTHRLEFVEMPVRCSNPPHETSETNTTNTSTTTTA NIAANQVQPPAMNAQGIPESVHGETATAGTTNTATTASTAQSGAVTMVTQSTPAPGPSTQ AAPSTEGQSNSIEQGSVSTVGQNIVQILPVSSTGVGATIAVRVSSSTNQEAATATLAQAL NPQPSVGLQQDQLLPPRELLADSRPETLAELGLSPEELAVAAAAEEAARFAALEEEAKAT TVAQTSLVSKGAATAAREETMDTSAAELATMQPAQLSQQALQTLVSLQSVVPLAELAQQD IERARQQQAAESNQPSRPAEALAPADSLNDSTSETNGPQELPSTVSSVQIPILKTTGLAP YTSLLTSTTNQNSSPMKTQAATALAQVANGIGLPASKHDASPNTQPKPTTRKEPNQWYDV GVFKTLSTVVVSYFLPAEGSQGEEDGSGDNIPDHSNLKSVKLDPGTAYKFRVAGINACGR GPFSEVSAFKTCMPGFPGAPSAIKISKVAEGAQLSWEPPAVTSGTIIEYSVYLALPGSQA ADPKPAGTSHLLFVRVYCGPVPSCLVSSSNLANAHIDTTTKPAIIFRIAAKNEKGYGPAT QVRWLQGELG NT seq 4713 nt NT seq  +upstreamnt  +downstreamnt atggcggctcccatactcaaatggaagcgcgtaaccaactcgagcgggccggtcccccgg cctcgccatggccaccgcgctgtctccatcaaagagctgatggttgttttcggtgggggc aacgaagggatcgtggacgagctgcatgtttacaattcagcaaccaatcagtggttcatc ccagcggtgaggggggacattccggcaggatgtgcggcttacggattcgtatgtgatggt actcgactgttggtgttcggtggcatggtggagtatggaaagtacagcaatgagctctat gagctacaggcaagcagatgggaatggaaaaagttgaaagccaaagcccccaaaaatggt cccccaccatgtgctcgtctcggacattgcttttctgtaattgacaataaatgttattta tttgggggattagctaatgacagtgaagatccaaaaaacaatattccacggtatttaaat gacctgtatatattggaactgaagccagggtcaggggttgtgggatgggacataccggtc acctatggcacaccaccaccacccagagagtctcacactgcagtcgtgtatcgcaacaaa gacaataaaaaaccaaagcttgtcatctatggtggaatgagtggctgtcgacttggagat ctgtggatactggatattgagaacttaacatggaataaaccagaagttgctggagttccg ccgctgccccgaagcctacactctgctacgatgattgggagcaaaatgtatgtttttggt ggctgggtcccccttgtgctggaagatgtcaaagctcctacgcatgagaaagagtggaaa tgcacaaatactctagcatgcctggatctggaaacaatgacttggacgcagatctccacg gaatcatttgaagataacattcctcgtgcaagagctggtcactgttcagtttccataagc acacggctttatgtgtggagtggccgagatggctacaggaaagcttggaacaatcaagtc tgttgtaaggatctgtggtatcttgaaacggaaaagcctcctgctcctggcaaagtccaa ctggttcgagcaagtaccaactcacttgaggttagctgggggttggtctccactgccgac agctacttgcttcagcttcagaaatatgatgttccaacggtcactactgctgttactcct ttgccaacctctgcagttacgggcatccggccatcctgcagtcccgctcctgcagcagca tcagtatcaccttctccagtacagtcaggagtccgctttgttacacagacgacccctgct gtgggaacccaggctgcatccctaaccaccagtgcaacgtcgccttctgtagttcagatt cctactgctgtagcttctccacgtgggccagcctcaccaatgatcagagccacgacaggg cagccagtggttgcatcagcagcttcaacgacacccctcatcactgtgcaacgacaagct acacctcagggcaaaacacctatctctgtggcagcccttccaccaggtgttcgcatggtg atgccagcacagaccacagcagggactccactcacctccagtccacagatgagtggaatg gcagctttagctgcagcagctgccgctactcagaagattccttccagcacagcggttacc tcagttggacttcatcctagcacaacagtggtaaaaacaatggccattgcttccggagtc agtaccctggcgagcactgtgaaggtagccactccatcagtcatggtcaacacaccagca acctcaatgctgaagacggctgctgcccagttagtgacacccactcatgctgccacttct actgcttcagctagacccattatcacagtgcacaaatcaggaacagtcactgtggctcag caggcacaagtggtgaccaccgtggtgggtggagtcacaaaaaccattacactagtcaag agccctatttccatggcaggaggaagcacattgatttccaacctgggaaaagtgctaact ctgcaggctaaaccagggcagcaggccaccatctcagccccagcctccactgggccactc acgcagatcttccagaccaaaggtcaactgcctccaggagctaccattttgaaacttgtt acttcagcagatgggaagcctgccaccatcatcaccacctcacaggctggaaatgtgggc cttaagcagactttcgtcagcctcagcaatgtgtcacctgcctcttcaaaaccagcgacc accattctcaaaaccatccctatgtctgcacttatttcacagcccggaactacgggtgtc acaggaagtcctggtatgaaatccccaattaccatcatcaccacaaaagtaatgacctct ggaactggaacaccaacaaaattcatcactgctgtacccaaactgcagacggggcaacag ggacttacccaggtattgctgaaaggtgctgcaggacagcctggcactatcctgcgaaca ttatctggaacaccagttactggagtcagactgatcactccagtaactgtttctgctgcc aaaccagcacttacaactttggtagtgaaagggaccacaggtgcaagtacgctggggacg atagcaggtacgactctcgcaggagtgtccaccgtttcaccaacgctcaacactcccatt gccactcttggtaccatcgccaaccttaccggccagataatcagtgcttcccctaacacc actcagaaacttactgctgtaactggaactacttccacagcccccatcatcaccattcag cctgtgtctgagccaaaccgtgtcacaattgttgcctcccctggtggcatggttgcacag caagcacagcagcttgtgaattcaggatctgctttggtcgcggcacctcaagtcgctact gtgaattcagaaactcagacccacaggcttgagtttgttgaaatgccagtcagatgttca aatcctccccatgagacatcagaaaccaacaccaccaacacatctacaactaccacagca aacattgcagcaaaccaagtccagccacctgccatgaatgcacaaggtattcctgaaagt gtgcatggtgaaacagcaacagcaggaacaacaaacactgcaaccactgcatctacagct cagagtggggcagttaccatggtaacacagtccacacctgctcctggaccttcgacacag gcagccccatcaactgaaggacaatctaatagcatcgagcaaggttctgtgtctacagtg ggacagaatattgtacagattctgcctgtcagctccactggtgttggtgccacaatagca gttagggtctccagcagcacaaaccaagaagcagcaacagctaccttggcacaggcattg aatcctcaacctagcgtcggactgcagcaagatcagctcctacctccgcgagagctgctg gctgatagccggccagagacccttgctgagctgggtctgtctcctgaggagctggctgta gcagctgctgctgaggaggcagcccgtttcgcagcactggaggaagaagctaaggcaacg acagtggcacaaacatctctggtctctaaaggggctgccacagcagcaagggaagagacc atggatacctcagcagcggagttagcaacaatgcaaccagcacagctgtcacagcaggca ctgcagacattggtgtctctgcagtccgtcgtaccattggctgaacttgcgcagcaggac atagaaagagcacgccagcaacaagcagcagaaagcaaccagccctcccgaccagcagaa gctctagctccagcagatagtctcaatgattctacctctgagaccaatgggccacaggaa ctacccagtacggtttcaagtgttcagatacctattctgaagaccacaggattggcacca tacacttctctcctgacatcaacaaccaaccaaaactctagtccaatgaaaacacaggca gctacagctttagcccaagtagccaatggaattggcctacctgcgtcgaaacatgatgcg tctcctaatacccagccaaaaccaacaaccaggaaggaacccaatcagtggtatgatgtt ggtgtattcaaaacgctgagcacagtggtggtttcctatttcttgcctgcagagggctcc caaggagaagaggatggcagtggggataacatccctgaccacagcaatctaaagtctgtg aaactggatccaggcactgcttataaattcagagttgctggcataaatgcttgtggacgg ggcccattcagtgaagtctcagcttttaagacctgcatgccaggattcccaggtgcacca tctgccatcaagatcagcaaggttgctgaaggtgcacagctctcctgggaacctcctgct gttacttctggcaccatcattgaatactcagtatatctggcacttccagggtcacaggca gcagatcccaaacctgcagggacttcccatctgctctttgtccgtgtttactgtgggcct gtacccagctgtctcgtgtcttcatcaaacctagcaaatgcacacatcgatacaaccaca aagcctgctataatctttaggatagcagccaagaatgaaaagggatatgggccagccact caggtcaggtggctacaaggtgagctgggatga

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