Rhincodon typus (whale shark): 109917929
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Entry
109917929 CDS
T06055
Symbol
usp8
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04137
Mitophagy - animal
rtp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109917929 (usp8)
04137 Mitophagy - animal
109917929 (usp8)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rtp01002
]
109917929 (usp8)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109917929 (usp8)
04121 Ubiquitin system [BR:
rtp04121
]
109917929 (usp8)
Enzymes [BR:
rtp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
109917929 (usp8)
Peptidases and inhibitors [BR:
rtp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
109917929 (usp8)
Membrane trafficking [BR:
rtp04131
]
Endosome - Lysosome transport
Others
Others
109917929 (usp8)
Ubiquitin system [BR:
rtp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
109917929 (usp8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP8_dimer
WW_USP8
UCH_1
Rhodanese
Motif
Other DBs
NCBI-GeneID:
109917929
NCBI-ProteinID:
XP_020373411
LinkDB
All DBs
Position
33:34779727..34821788
Genome browser
AA seq
1092 aa
AA seq
DB search
MPAVSSDLKELYLSTCLADLNKKAEVKVETRSTKNYVTSACKIFKAAEECRLDRDEEKAY
VLYMKYLTVYDLIRKRPDFKHQQDYYLSLLGPANFRKAIEAAERLSESLKLRYEEAEVRK
KLEENERLQEEKRKQQEEAKSKGCDNSLKSTMKNSSDSSGIKKRNLKEDYELNDKETRAE
CNDSLQGAITAEKLFAMLQDINTEVIIMDARSYKDYQESHMQVARLRCISVPEEAVSPGI
TVNQIELKLPEESKEIWRKRQFADYIILLDWDSSIDLVKRGTILQSLKDALYKWDSQIIL
RSEPLVLEGGYDSWLLCYPMYTTNAKVTVPKKESHGAIQVSLDFSYPSLEEPPPPSEDLN
EKKAVQELEICNEHTSQLEETPKKVNLKSINVPNGVLGPGVPVTGQPIAMKTIPQIDRTK
KPPLKQPNQHQPKSEVAGADNLPVHNGPVIPDRSTKPFVESQHSLTDEERNQIHAEAALI
GEKARKEKEQRERRQEEERKEKERLERERQEEHIEKEQCEEEEKEFKIKAEQERERKDNE
EQRAQEREDSQQKEEERKRLAEQKKTSEEKGKIESQIRDQADPRKSGGEQSVSELEGPHC
TNLEKQEHRDTLTRARSEEMGRTVPGLPPGWMKFLDVVTGTYRYYHSPTNSVHMYPPEMV
PSITPPATPPTHKAKPRSATDVDVPKLKRSFSSPDIAQTVQEDQNKATTKIVPRVNRETK
PPGYSKTEISSPSASQIRNLNPVYGGMGRALTGLRNLGNTCYMNSILQCLCNTPHLAEYF
NKNFYQQDINRSNILGHKGEVAEEFGVIMKSLWSGQYKCISPRDFKGRIGKINDTFAGYV
QQDSQELLLFLMDGLHEDLNKADRKRYKEESTDSLDDTRAADLAWQKHKLLNESIIVALF
QGQFKSTVQCLTCHKRSRTFEAFMYLSLPLPSSSKCSLQDCLKLFSKEEKLTDNNRFHCS
NCKAHRDSTKKLEIWKLPPILLIHLKRFSYEGRWKQKLQTNVDFPLENLDLFSYIIGPRN
NVKRYNLFAVSNHYGGLDGGHYTAYCKNAVKQRWFKFDDQDVSEISPSSVRSSAAYILFY
SSLELRVVDLAT
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcggtatcaagtgatctaaaggagttgtatttgtctacatgcttggctgacctt
aataagaaagcagaagtgaaggttgaaacgagaagcactaaaaactatgtcacaagtgct
tgtaaaatttttaaggcagcagaggaatgtagattggatagagatgaggagaaagcatat
gtcctttatatgaagtacctgactgtgtacgatctcattcggaaaagacctgatttcaaa
caccaacaggactactatctttccctgcttggccctgcaaacttccgtaaagctatagag
gcagcagaaaggctttcagaaagcctcaagctaagatatgaggaggctgaagtacgtaaa
aagcttgaagagaatgaaaggctgcaagaagagaagagaaaacagcaggaagaagccaaa
agcaagggatgtgataacagcttgaaatcaacaatgaagaattcttcagactcttctggc
attaagaaaagaaatttgaaggaggactatgaattaaatgacaaggaaacccgtgcagag
tgcaatgattcacttcagggagcaatcactgcagaaaagttgtttgcaatgttgcaagac
ataaacacagaggtgatcatcatggatgcacgaagctacaaggattaccaggaatctcac
atgcaggtggccagattgcgctgtataagtgtaccagaagaagctgtcagtccaggcatc
actgttaaccagatagagttgaaacttccagaggagtcaaaagagatatggcgaaagcgt
cagtttgctgattacattattctgttggattgggacagttccattgacctcgtgaaaaga
ggaaccattcttcagagtctcaaggatgcactttacaagtgggatagccagataattctc
cggagtgaaccactggtattggagggtggctacgacagctggcttctctgctatccaatg
tataccacaaatgccaaagtgactgttccgaagaaagaatctcatggagctattcaagtg
tctttggacttcagttacccatccttggaggaacctcccccaccctctgaagaccttaat
gaaaagaaggctgtccaagaattggaaatttgtaatgaacacacatctcagctcgaagag
acaccaaaaaaagtcaacctaaaaagtatcaacgtgcctaatggtgtccttggccctggg
gttccagtcactgggcagcctattgcaatgaaaaccattccacagattgatcgaacaaaa
aaacctccactgaaacaacctaatcaacatcagcctaaatcagaggttgctggtgctgac
aatctgcctgttcacaatggaccagtgattcctgatcggtcaacaaagccctttgtagaa
tcacagcattcactgactgatgaagaaagaaatcagattcatgctgaagcagccctaatt
ggtgagaaggccagaaaggagaaagaacagcgtgaacgaaggcaggaagaagaaagaaaa
gagaaagagagattggagagagaaaggcaagaagagcatatagaaaaagagcagtgtgag
gaggaggaaaaagagttcaaaataaaagctgaacaagaaagagagcgcaaagataatgag
gaacagagagcacaggaacgtgaagacagccagcaaaaagaagaagaaaggaaaagattg
gcagagcaaaaaaagacatcagaagaaaaaggcaaaattgaaagtcagataagagatcaa
gccgatccaaggaaaagtggtggtgaacaatcagtctctgagctggaaggcccccattgc
acaaacttagagaaacaggaacatagagatacattaaccagggcaagaagtgaggaaatg
ggccgaacagttccaggcttaccacccggatggatgaagtttcttgatgtggtgactgga
acctaccgttactatcattcaccaactaactctgttcatatgtatccgcctgaaatggtg
ccatcaattactcctcctgcaacccccccaactcacaaagccaaaccacgaagtgcaact
gacgttgacgttcctaagttaaaacgttcgttctcctcaccggatattgctcaaactgtt
caagaagaccaaaacaaagcaacgacaaaaatagtgcccagagtcaatcgggaaaccaag
ccccctggctacagcaaaactgaaatctccagcccctctgcttctcaaatccgaaacctg
aaccctgtatatggtgggatggggcgagcactgactggtctgcgaaaccttggcaacacc
tgctatatgaattctattttgcaatgtttgtgcaatactcctcatctggcagagtacttc
aataaaaatttctaccaacaagatattaacaggtcaaacattcttggtcataaaggtgag
gtggctgaagagtttggtgtgataatgaagagcttgtggtcaggtcaatataaatgcatc
agtccaagggactttaagggacgcataggaaaaataaatgatacgtttgcagggtatgtg
caacaagattcccaggaattgcttctgtttctaatggatggactccatgaagatctcaat
aaagctgaccggaagagatacaaagaagaaagtacagatagcttggatgacacaagggca
gcagatttagcctggcaaaagcacaaactactcaatgagtccattattgtggctttgttc
caaggccagtttaagtcaactgtacagtgtctgacttgtcataagaggtctcgaacattt
gaagcctttatgtatctatctttgccacttccatcatctagcaaatgttctctccaggat
tgtctcaaattgttttccaaagaggagaaactgacagacaataaccgattccactgcagc
aattgcaaagcgcacagggactcaacaaagaagctagagatctggaaactgcctccgatc
ctgttgatacatctaaaacgattctcttatgaagggagatggaaacagaagctgcagaca
aacgttgactttccattggagaatctggacttgttcagctacataattggccccaggaac
aatgtgaaaagatacaatttatttgccgtgtcgaaccattatggaggactagatggagga
cactatacagcctactgcaagaatgctgtgaaacagcgctggttcaagtttgatgatcaa
gatgtttcagaaatatctccttcttcagtgagatcatcagcagcctacattctcttctac
agctcattggagttgcgtgtggttgatttagctacatag
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integrated database retrieval system
