Rhincodon typus (whale shark): 109917937
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Entry
109917937 CDS
T06055
Symbol
tra2a
Name
(RefSeq) transformer-2 protein homolog alpha isoform X1
KO
K12897
transformer-2 protein
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109917937 (tra2a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rtp01009
]
109917937 (tra2a)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rtp03041
]
109917937 (tra2a)
Protein phosphatases and associated proteins [BR:
rtp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109917937 (tra2a)
Spliceosome [BR:
rtp03041
]
Common components
Common spliceosomal components
SR proteins
109917937 (tra2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Motif
Other DBs
NCBI-GeneID:
109917937
NCBI-ProteinID:
XP_048462494
LinkDB
All DBs
Position
2:79011199..79021104
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AA seq
322 aa
AA seq
DB search
MCPRLSNESRSPSKSPSGSAGRVKSESRSASRSPSRASKRSESRSRSRSKSRSHSRRHSH
RRYSRSRSRSHSHRRRSRSRSYTPEYRSRRRSRSHSPMSSRRRHAGSRTGHVSAKHGALI
VDVEKSAARTAPSSQMKDDSWRRTGYGKKEGKLGSQNANPDPNTCLGVFGLSLYTTERDL
REVFSRYGPLAGVNVVYDQRTGRSRGFAFVYFERLEDAKEAMERANGMELDGRRIRVDYS
ITKRPHTPTPGIYMGRPTHSSGGGGGGGRRRDSYYDRGYDKYDRYDDRDYDYRYSRRRSP
SPYYSRGYRSRSRSRSYSPRRY
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcctaggttaagtaatgagtcacgttcaccatccaaatctccaagtgggagtgct
ggccgtgtaaaatcagaaagccgctctgcgtcacgcagcccatctagggcctcaaaacgt
tcagaatcacgctcccgatcacggtccaagtcaagatctcactccagaagacattcgcac
cggcgttattcacgctccaggtcacggtcccattcacaccgaaggcgatctcgtagtagg
tcttatacacccgagtatcgatcgcgcagaaggagccgtagtcattctccaatgtccagc
cgaagacgccatgcaggaagtagaacgggacatgtgtcagcgaaacacggagcgttgata
gtagatgtggagaagtccgctgccaggactgccccatcgtcccagatgaaggatgattcc
tggaggcgaacaggatatgggaagaaagaagggaaactcggttctcaaaacgctaatcca
gatccaaacacttgcctaggtgtttttggccttagtttgtacaccactgaacgtgatctt
cgtgaagttttctctcggtatgggccattggctggagtcaatgttgtctacgatcaaagg
actggtcgttcacgaggatttgcatttgtttactttgaaagattggaggatgctaaagag
gcaatggagcgtgcaaatggaatggaactggatggtagacgaattcgtgttgattattcc
attacaaagaggccacacactcccactcctgggatttacatgggacgacctactcacagt
agtggtggaggtggtggtggaggacgtcgtcgtgattcgtactatgatcgaggttacgat
aaatatgatcgctatgatgaccgggactatgattatcgatacagtagacgacgatcacca
tcaccctactacagcagaggataccgatcacgctcgagatcgcgatcttattcgccacgt
cgttactga
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