Rhincodon typus (whale shark): 109917957
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Entry
109917957 CDS
T06055
Symbol
chmp5b
Name
(RefSeq) charged multivesicular body protein 5
KO
K12198
charged multivesicular body protein 5
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04144
Endocytosis
rtp04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109917957 (chmp5b)
09143 Cell growth and death
04217 Necroptosis
109917957 (chmp5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109917957 (chmp5b)
Membrane trafficking [BR:
rtp04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
109917957 (chmp5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
NPV_P10
DUF948
Histone_HNS_N
DUF6468
Hydantoinase_B
Phage_GP20
TBCC_N
Alpha-E
DUF848
CPG4
dCache_2
Motif
Other DBs
NCBI-GeneID:
109917957
NCBI-ProteinID:
XP_048466647
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All DBs
Position
2:complement(67739764..67751205)
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AA seq
172 aa
AA seq
DB search
MKKMRDGASKNMVKQKAMRVLKQKRMYEQQRDNLMQQSFNMEQANYTIQTLKDTKTTVDA
MKTGVKEMKKAYKQVKIDQIENIQDQLEDMMEEANDVQEALSRSYGTPEIDEDDLEAELD
ALGDELLADEDSSYLDDAASAPSIPEGVPTDAKTNKDGVLVDEFGLPQIPAT
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaatgagagatggtgcatcaaagaatatggtaaagcaaaaggcaatgcgcgtt
ttgaagcaaaagagaatgtatgaacaacagagagacaatctcatgcagcagtcgttcaac
atggaacaagccaattataccatacagacattgaaagacacaaaaacaacggtggatgca
atgaaaactggtgtcaaggaaatgaagaaagcttacaaacaagtcaagattgatcagatt
gagaatatacaagatcaactggaagacatgatggaagaagcaaatgatgtgcaggaggcc
ttgagtcgcagttatggtacgccagagatcgatgaggatgatctggaagctgaactggat
gcattgggtgatgagcttctagctgatgaagattcatcttatctagatgatgctgcatct
gcaccatctattcctgaaggtgttcccactgacgcaaaaaccaacaaggatggcgtattg
gtggacgaatttggcctgcctcagattcctgctacttaa
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