Rhincodon typus (whale shark): 109918075
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Entry
109918075 CDS
T06055
Symbol
recql
Name
(RefSeq) ATP-dependent DNA helicase Q1
KO
K10899
ATP-dependent DNA helicase Q1 [EC:
5.6.2.4
]
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtp03400
]
109918075 (recql)
Enzymes [BR:
rtp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
109918075 (recql)
DNA repair and recombination proteins [BR:
rtp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
109918075 (recql)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
RQC
KOW
KOW4_SPT5
CtIP_N
Plasmodium_Vir
YabA
COG3_N
KOW5_SPT5
Motif
Other DBs
NCBI-GeneID:
109918075
NCBI-ProteinID:
XP_048466162
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All DBs
Position
22:7581675..7625466
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AA seq
646 aa
AA seq
DB search
MEAVSDLEEQLASVASEIQALEVQIQELLERQQMLVAKERALKTKIESFSANCGAGSSTA
PAVSAEDWNKKDFSWSQKVDETLKSVFKLQTFRPLQLQAINVTMSGKDIFLIMPTGGGKS
LCYELPAACSSGFTLVICPLISLMEDQLMVLEQLGIASTMLNSNSTKEHVKWVHDEMLNK
SSKLKLLYVTPEKIAKSKVFMSKLEKAYNAGCLTRIAVDEVHCCSQWGHDFRPDYKSLGI
LKRQFPKTPLIGLTATATSSVLEDVKKILCVPKCLMFTASFNRPNLFYEIRQKPASFEAC
IEDIVKIINGRYKGKSGIIYCLSQKDTEQVASSLQKLGIAAGCYHANMEGAEKSKVHKDW
TLNKIKVVVATVAFGMGIDKADVRFVIHQTLSKSMENYYQESGRAGRDDLKADCILYYGF
MDIFRQSTMVVMENVGQQKLYEMVAYCQDSRRCRRVQIAQYFDEVWDSAKCNKMCDNCNS
ETSYEKVDVTSYCADLIKILKQAEQLGEKLTPLKLIEAWNGKGPSKLRVASVSPPNLSRN
EMEELIVHLLLEQYLKEDFSFTAFATISYLKEAPKANLLNNKKHVISMRMKLRSNKLDSS
AEEVPEKVSNAQQKETGSKRKQTSTAHKVTPNKKSKVPDDIPLNLD
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagtttcagatctggaggagcagttggcatcagttgccagtgagattcaagcc
ttggaggtccagattcaggaacttctggagagacagcagatgctggttgcaaaggagcgg
gcactaaagacgaagatagagtctttttcggcgaattgcggggccggatcaagcacagca
cctgctgtatctgcggaggactggaacaagaaagatttttcatggtcacagaaggtggat
gagactttgaagagcgtatttaaactgcaaacctttcgaccattgcagcttcaggccatc
aatgttacgatgtcagggaaggatatctttctgataatgccgacaggtggtgggaagagc
ttgtgctatgagctgccagctgcctgttccagtggattcactctggtaatctgtccctta
atctcgttgatggaagatcaactaatggtcctagaacaattgggtattgcatctacaatg
ctgaattccaatagtactaaggagcatgtcaagtgggtccatgatgaaatgctcaacaag
tcttccaagttgaagctcctgtatgtgactccggagaaaattgctaaaagtaaagtcttc
atgtccaagctggaaaaggcatacaacgcaggatgcctgactcgtattgccgtagatgag
gttcattgttgcagtcagtggggtcatgatttcagacctgactacaagagccttggtatc
ctgaaacgtcagttcccaaagactccgttaattggattgactgcaaccgcaacaagcagt
gtcttggaggatgtgaaaaaaatcctgtgtgttcccaaatgcctcatgtttacggcttcc
ttcaacagacccaatctgttttacgagatccgtcaaaagccagcaagttttgaagcctgc
attgaagatatagtcaaaatcatcaatggacgttacaaaggaaaatctggaataatctat
tgcctttctcagaaagatactgagcaggtcgctagtagtctgcaaaagcttggcattgca
gctgggtgttaccatgccaacatggagggtgctgaaaagagtaaagttcataaggattgg
actttaaacaaaataaaggttgttgtggcaacagtggcatttggtatgggtattgacaaa
gctgatgtgcgatttgtgatccatcagactctcagcaaatcaatggagaattactaccaa
gagagtggacgggcaggtcgagatgatcttaaggccgattgtattttgtattatggattt
atggatatcttcaggcaaagcacgatggtggtcatggagaatgtaggacagcagaaactg
tatgagatggtggcgtactgtcaggattcacgaagatgtagacgcgtacagatagcacag
tattttgatgaagtttgggattcggcaaagtgcaacaaaatgtgcgacaactgcaacagt
gaaacatcatatgaaaaggtcgatgtcacaagttactgtgctgatctgatcaaaatcctg
aaacaagctgagcagctcggtgaaaagcttaccccactgaaactcattgaagcctggaat
ggaaagggaccttccaaactcagggtggcttctgtaagccctccaaatctctccaggaat
gaaatggaagaactaattgtccatcttcttctggaacaatacttgaaagaagacttcagc
tttaccgcattcgccacaatttcatacttgaaggaagcacccaaggcaaacctgctgaac
aataagaagcatgtcatttctatgcgtatgaaactgagaagtaacaagttggattcttcc
gctgaggaagtgccggaaaaagtttcaaatgctcagcagaaagagaccggaagtaagcgt
aaacagacttctactgcacacaaagtaacccccaacaagaaaagcaaggtgccagatgat
atcccacttaacctcgactga
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