Rhincodon typus (whale shark): 109918161
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Entry
109918161 CDS
T06055
Name
(RefSeq) multiple PDZ domain protein
Organism
rtp
Rhincodon typus (whale shark)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
L27_2
Tricorn_PDZ
Motif
Other DBs
NCBI-GeneID:
109918161
NCBI-ProteinID:
XP_048476344
LinkDB
All DBs
Position
3:complement(44052763..44316392)
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AA seq
1979 aa
AA seq
DB search
MYCIYLPLHAIFCYYFDTVTSTNFLLVDTQRALLAVERLQAKLRERGDTANEERLSLLRS
VLQSPLFNQILNLRSSVQHLKDQVNVVPPAIPPGVDLSQAACSPVTSISSPLNESYMIAQ
QNGSKEIEHETSVQQGKQSNEEFEQILRKMAHGRSIEYINLMKPACDGLGFSIVGLKNEN
NGELGIFVQEVQEGSVSARDGKLKESDQILAINRQLLDQTVTHPQAIGILQKATEQVQLV
VARGSVPRLSSPGASRTPSDASTLSAHSSSVHWQIVETIELVNDGCGLGFGIVGGRTTGV
IVKTILPGGVADLPEPICCQGVDGEIFDVELTKDVHGLGITIAGYVGDKNLEPSGIFVKS
ITQASAVEQDGRIHVGDQIIAVDGTNIQSFTNHQAVEMLRHTGQTVHLILMRRGLEPETL
TQPECKDEVKPEKCGDVLTIDNKHASAMIEDSSALVNWISNTSSVAEQGIEAESETRFTA
GFQLNSSEEERLCVKWQDILGTNSQIVVTQVTKFSESSGLGISLEAATGHHYIRSILPEG
PVGCNGRLYSGDELLEVNGIPLLGQSHKDVVSILKDLPISVTMICCRPILKSKKETDVDH
MVPIEEPIQSIEEPLEFLHSSASLAWIEDQTESIVAHGFLQRHINLNEINATSNTDDAVV
GEMERKQSDVEAQSSLAMWESEIQNIELEKGSSGLGFSILDYQDPADPMRTVIVIRSLVP
SGVAEQDGRLLPGDRLMFVNNINLENATLEEAVQALKGASGGKVRIGVAKPLPVEATETG
FAGGKTFDKDLSFEEEDEHQSSTVAMHGSACSSDLNVNLSILSLTYEDAQENSLGACSMS
STEESDEKQMSLAKGFEKTITIAKGSASLGMTVSASKDGSGMMVRNIIHGGSISRDARIG
VGDSILAINGEPTTDLTNAESRAMLRRYSLTGPDIIITYVPAENLEKYRLIMSRQLEGIT
TANASSLLPASTELPEREEGEGEESDLPNSSYNNWRQARRVELWREPAKSLGISIVGGRG
MGSRLSTGEVMRGIFIKHVLEDSPAGRNRTLKTGDRIVEVDGVDLRDASHEEAVEAIRKA
GNPVVFLVQSLISRPRKQPLSFLQSNPLPESSSGSNSTNLFADSFQTHNSQTSTASIDEK
AFCQAHYSMTKSPFPENKFKVSASRARTFLHPFPTNSYAINPFKTASQPDIETEIMSALS
DPQLLPSESVEQEETSSIVASQENMGNKSEDGLEEVDEFGYSWKKIKQRYGSLMGELHMI
ELEKGKSGLGLSLAGNKDRSRMSVFVVGIDANGAAGKDGRIQIADELLEINGQLLYGRSH
QNASSIIKSAPPKVKIIFIRSTDAVNQMAVSPAKLADIITATSGTHQEKEPSTSLSQTGK
DLTLFKNTQHILLAKDQGGLGIAISEESTHDGVIIKSLTENGTASKDGRIKVGDRILAVD
DEPVAGHPVEKVVSLLKKAKNTVKLTISLDEVNIQTPSVSTASFESKSIQSPSIQNIAES
ADTDSDNKGSSRASSPGSSSFDISSCPIVPGRETTIEISKGRTGLGLSIVGGADTLLGAI
IIHEVYEEGAAAKDGRLWAGDQILEVNGIDLRVATHDEAINVLRQTPQKVRLTVYRDEGH
YKEEDMYDLLIVELHKKPGKGLGLSIVGKRNDTGVFVSDIVKGGIVDLDGSLVQGDQILS
VNGEDVRSATQETVAAMLKCAQGTVRLEVGRLKAGSFSPDRRGSQSSQVSEGSSSGGLTT
FYSATSGSTQADLHETGYRKPAWTEIQGLRTVEFNKGPTDSLGISIAGGVGSPLGDVPIF
IAMMQPNGVAAQTQKLRIGDRIVSICGKPTEGLTHSQAVSVLKNVSGRIELQVVAGGDVS
VITNQQQEHTTTTLSVSGLIASSILHDDLGPPQYKTITLDRGADGLGFSIVGGYGSPHGD
LPIYVKTVFVKGAAAEDGRLKRGDQIIAVNGQSLEGVTHEEAVGILKRTKGNVTLTVLS
NT seq
5940 nt
NT seq
+upstream
nt +downstream
nt
atgtattgtatatacttaccattgcatgctatattttgctattattttgacactgtcact
tctactaattttttacttgtagatacccagcgagctttgctggctgtggaacggttacag
gcaaagctacgagaaagaggggatacagcaaatgaggagagactgagtttattgagatct
gtgctacagagcccactcttcaaccaaatcctgaacttgcggagctctgttcaacatttg
aaagatcaggtgaacgtcgtgccgcctgccatacctccaggcgttgatctttctcaagct
gcctgctcacctgttacttctatttcatctccactgaatgaatcgtacatgatagctcag
cagaatggaagtaaagaaattgaacatgaaacctcagtgcagcaaggcaagcagtccaat
gaagaatttgagcagattttgaggaaaatggcccatggtcgttccattgaatacataaat
ttgatgaaacctgcctgcgatggtttggggttcagtattgtaggacttaagaatgaaaat
aatggggaactggggatctttgttcaagaagtccaagagggcagtgtgtcagcaagagat
ggtaaactaaaggaatcggaccaaatcctagctatcaacagacagctcctagatcagact
gtcacccatccacaagctattggcatcctgcagaaagccacagaacaggttcagttggtg
gttgccagaggatctgttccacgtttgtccagtccaggagcttcacgtacaccgtcggat
gcgagtacactctctgcccattcttcttctgtccactggcagattgttgaaacgattgag
ctagtaaacgatggctgtggtttgggatttggaattgtaggtggaagaacaactggtgta
attgtgaagactattttacctggaggagttgctgacctacctgaaccaatctgttgtcag
ggtgttgatggtgaaatattcgatgtggaacttacaaaagatgttcatggactaggcata
actattgctggttatgttggtgacaaaaatctagagccttctggtatctttgtgaaaagc
ataactcaagcaagtgcggttgaacaggatggaagaatacatgttggtgatcagataata
gctgtggacggaacaaatattcaaagcttcactaaccatcaagcagtggaaatgttgcgt
cacactggccaaactgtgcatcttattttaatgaggaggggacttgaaccagaaactttg
acacagcctgagtgcaaagatgaagtaaaacctgaaaagtgtggagatgtcctcacaata
gataataaacatgcttcagcaatgattgaagattcatcagctttggtgaattggatttca
aatacttcatctgttgctgagcaaggaattgaagctgaaagtgaaaccaggttcacagca
ggctttcagctgaactcatcagaagaggaaagactttgtgttaaatggcaggatattctt
ggaactaactctcaaattgtggtgactcaagtaacaaagttcagtgaaagtagtggcctt
ggtataagtttggaagccgctactgggcatcattatatacgttccattctccctgaggga
cccgtgggatgtaacgggagactgtatagtggagatgagctattagaggtgaatggaata
ccactccttggtcagagccacaaagatgttgtcagtatactaaaagacttgcctatcagt
gtcaccatgatctgctgccgcccaatcctgaagtccaagaaggaaactgatgtagatcat
atggttcctatagaagaacccattcagtcaatagaggagccattggaatttcttcattca
tcggcatctctagcttggattgaggatcaaacagaatccattgttgcccatggattttta
cagcgtcacatcaatctaaatgagattaatgcaacatctaatacagatgatgctgtggtg
ggtgaaatggaaagaaagcagagtgacgttgaggcacagagttctctggcaatgtgggag
tctgaaatccaaaacatagaactggagaaggggagctcaggccttgggttcagcattctg
gattatcaggatccagctgacccaatgcgaacagttattgtaattcgatcgttagtgccc
agtggagtggcagaacaagatggtcgacttcttccaggagaccgactcatgtttgttaac
aacatcaacttggagaatgctactcttgaagaagcggttcaggcactgaaaggtgcatca
ggaggcaaagttagaattggggtagccaaacctctgccagtagaagcaactgaaacaggt
tttgctggtggaaaaacgtttgacaaggacttatcatttgaggaagaggatgaacatcaa
tcttcaactgttgccatgcatggcagtgcttgtagttcagacctgaatgttaacctctca
attctatcactgacttatgaggatgcacaagaaaattccttgggtgcttgcagcatgtcc
tccactgaagagagtgatgagaaacagatgtccttagccaaaggatttgagaaaaccatt
accattgcaaaaggcagtgctagtctgggaatgactgtgagtgccagtaaagatggctca
ggaatgatggtgcgtaacattattcatggtggatccatcagtcgtgatgcccgaattggg
gtaggtgactccatcttagcaatcaatggggaaccaactacagatctcaccaatgctgag
tctcgtgcgatgcttcgaagatactctttaactggaccagacataattatcacatatgta
cctgcagagaacttggaaaagtataggctgatcatgagtagacaacttgaaggaatcacc
acagctaatgcatcatcattgctccctgccagcactgagttgccagagagggaagaaggt
gagggagaagagagtgacctgccaaattcatcctacaacaactggagacaagctcggcga
gtggagttatggcgagaacctgcaaagtcattgggaatcagtattgttggtggaagagga
atggggagccgactgagtactggagaggtcatgagaggaatattcatcaaacatgtccta
gaggacagtccagctggaagaaacagaacgttaaaaactggggacagaattgttgaggta
gatggggttgacttgcgagatgccagccatgaagaggcagttgaagctatacgaaaagca
ggcaatcctgtagtgtttttagtccagagtttaataagcaggcctcggaaacaacctttg
tctttcctgcaatctaaccccttgcctgaatcgagcagtggcagcaacagtactaaccta
tttgctgactcttttcagacccacaatagccagacctctacagcttcaattgatgagaag
gccttctgtcaagcccattattctatgaccaaaagtccatttcctgaaaataaattcaag
gtttctgcatctcgagctaggacttttctgcaccctttcccaactaactcatatgcaatc
aatccatttaagaccgccagccagccagatatagagactgaaattatgtcagcactctca
gatccacagctattgccatctgaatctgttgaacaagaggagacaagctcaattgtggca
tcacaagagaacatgggcaataaatcagaagatggattggaggaagttgatgaatttggt
tacagctggaaaaagatcaaacaacgatatggaagcttgatgggagagctgcatatgatt
gagctggagaaggggaagagtgggctaggtctgagtctggctggcaacaaggaccgatcc
agaatgagtgtttttgtagttggcatcgatgcaaatggagcagctggtaaagatggcagg
atacagattgcagatgagttgctagagataaatgggcagttactatatggtcgtagtcat
caaaatgcttcatcaataatcaaaagtgcgccaccaaaagtgaagattatatttattaga
agcacagatgcagtcaatcaaatggcagtcagtcctgcaaaattggctgatataatcaca
gctacttcaggaacccaccaggagaaagagccaagtacatcattatcccaaactggaaag
gatctgaccttgtttaaaaatactcaacatattctacttgctaaggatcaaggtggactt
ggaattgcaattagtgaagagagtacacatgatggtgtgattattaagagtttaacagaa
aatggtacagcttcaaaagatggaaggattaaggttggggatcgtatcttggctgtggat
gatgaacctgttgcgggacaccctgttgaaaaggttgtaagtttgctgaagaaagcaaag
aatactgtaaaactaaccatcagtttggatgaagtgaatatacagacaccatctgtttcc
actgcttcattcgagtctaaaagcattcagtctccttcaatacagaacattgctgaatcg
gctgatacagattccgacaataagggctcgagcagagcttcatcccccggttcttcatct
ttcgacatatcatcttgtccaattgtccctggacgagaaacaacgatcgaaatttcaaaa
ggacgcactggacttgggctgagtattgttggaggagcagatacgttattgggtgccata
attattcacgaagtctatgaagaaggagctgcagccaaagatggcagactgtgggctggt
gatcagatattggaggttaatggaattgatttgagagttgccactcatgatgaagcaata
aatgttctgagacaaactccacaaaaagtacggctgacagtctacagggatgaaggtcat
tataaggaggaagatatgtatgatttgctgattgttgaattgcacaagaaaccagggaaa
ggtcttggactgagtattgttggaaaaagaaatgatactggggtctttgtgtcagacatt
gtgaaaggaggaatagtagatctggatggaagccttgtgcaaggggaccaaatactgtct
gtgaatggagaggatgttcgaagcgcaactcaggagactgttgctgctatgctgaagtgt
gcacaaggcacagtgagattagaggttggcaggttaaaggctggatcattctcacctgat
agaagaggttcccaaagtagccaggtcagtgaagggagtagtagtggcggactgaccacg
ttctattctgctacatctggatctacccaagctgatctacacgaaactgggtacagaaaa
cctgcctggactgagatccaagggctaagaaccgtggagtttaataaggggcctactgat
tcactgggaatcagcattgcaggaggagtaggtagtcctcttggagatgtccccattttt
attgcaatgatgcagccaaatggagtagcagcccagacccagaagctgcggattggggac
agaattgtaagtatttgtgggaaacctacagagggcttgactcattcccaggctgtcagc
gtgctgaagaatgtttcaggtcgtattgaattacaggtggttgcaggcggtgatgttagt
gtgataactaatcagcagcaggagcataccacaactacactttctgtctcaggattgata
gcaagtagcatccttcatgatgacctagggcctccacaatataaaacaattactttggac
agaggtgctgatggactgggctttagtattgttggtggatatggcagtcctcatggagat
cttcctatttatgtgaagacagtatttgtgaagggagcagctgctgaagatgggcgcctg
aaacgtggggatcaaataattgctgtcaatggacaaagcctcgagggcgtgacacatgaa
gaagctgttggtatcctgaagcgcacaaaagggaatgttactctaacagtactttcctaa
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