Rhincodon typus (whale shark): 109918347
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Entry
109918347 CDS
T06055
Symbol
lsm11
Name
(RefSeq) U7 snRNA-associated Sm-like protein LSm11
KO
K25592
U7 snRNA-associated Sm-like protein LSm11
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtp03019
]
109918347 (lsm11)
Messenger RNA biogenesis [BR:
rtp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
109918347 (lsm11)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM11_N
LSM
Motif
Other DBs
NCBI-GeneID:
109918347
NCBI-ProteinID:
XP_020373856
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All DBs
Position
12:complement(8937684..8952504)
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AA seq
344 aa
AA seq
DB search
MAEAESSEPGLEEDEDDEAGRLNVSSPRFDPYLALYSSLPPPLPFPNVRTFNNIAEYQSF
LRRRRQQQEPGDPAQAQAQAQASGCHRARGRRRNAAWPPPDPDRIERLKKLMVAEQSSDD
RPRPLRRERAPKNVLTRMALHEGSPLGELYRCVQDRIKVNVHIRTFKGLRGVCSGFLVTF
DKFWNMALVDVDETFRKPVLGKAFYNEPVLTVGRLFDRLKLQERSASEEPGAKTTEQTGC
LPEKLEGAKAEQDDSKNLTCALKTGLTQVTSDTLNLSAQNEGGDIDRSKGNTKETSLVLR
TLTGGKKKLRKKSLPRIDYQQVSQRHVNQLFIRGENVLLISFMQ
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggccgagagctcagagcccgggctggaggaggacgaggatgacgaggccggg
cggctgaatgtcagctctccgcgttttgacccgtacctggcgctgtacagcagcctgccg
ccgccgctgcctttccccaatgtccgcaccttcaacaacattgccgagtaccagagcttc
ctgaggcggcggcggcagcagcaggaacccggggacccggcccaggcccaggcccaggct
caggcctccggctgccacagggcccgcgggcgccgccgcaatgccgcctggcctcccccg
gaccccgacaggatcgagcgcctcaagaagctgatggtggccgagcagagcagcgacgac
aggcccaggcccctccggagggagcgggccccgaaaaatgtgctgaccaggatggcccta
catgaaggcagcccactgggtgaattgtatcgttgcgttcaggacaggataaaggtcaat
gtccatattcggactttcaaaggactacggggtgtctgctcaggattcttggttacattc
gacaagttctggaatatggcacttgtagatgtggatgagaccttcaggaaacctgtcctt
ggaaaagccttttacaatgaaccagtattaaccgttggcaggctttttgatcgtctgaaa
ctacaagaaagatctgcaagtgaggaaccaggtgccaaaactacagaacagacaggctgc
ttacccgagaagttggaaggtgctaaagctgaacaggatgacagcaaaaacctgacctgt
gcacttaaaacaggactcacgcaggtaacctccgataccttaaacctctctgcacagaat
gaaggaggagacattgatcgatcaaagggaaacaccaaagaaacgagcttggtgctcagg
acattgacaggagggaaaaagaaactgagaaagaaatccctacccaggatagattatcag
caggtttctcaaagacatgtcaatcaacttttcatccggggagagaatgtcttactgatt
agtttcatgcaatga
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integrated database retrieval system
