Rhincodon typus (whale shark): 109918531
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Entry
109918531 CDS
T06055
Symbol
ptafr
Name
(RefSeq) platelet-activating factor receptor
KO
K04279
platelet-activating factor receptor
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04020
Calcium signaling pathway
rtp04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
109918531 (ptafr)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109918531 (ptafr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
rtp04030
]
109918531 (ptafr)
G protein-coupled receptors [BR:
rtp04030
]
Rhodopsin family
Others
Platelet activating factor
109918531 (ptafr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
Motif
Other DBs
NCBI-GeneID:
109918531
NCBI-ProteinID:
XP_020374051
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All DBs
Position
27:11075434..11166373
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AA seq
354 aa
AA seq
DB search
MNSFDGNISHSTVTGSAYNTNSSCQIDAEFRYTLLPIVYSLVFILGLIGNCYVLWVFKRM
TPAKSMTEIKIFMVNLSVADLLFILALPFWVVYYSTKGNWIFGDIPCRVAGCLFFINNYC
SIVFLSVISYNRYCAVAYPVETVQYNGRKRGFIISTIIWTVVVGSAIPFLCQRGTNEVGG
VTHCFEGYDMNSALPVVIIQFILIGAFFIAFLVTIICNFLILNLLSTKAAQPSRSEKVKK
QAFRMVCAVITVFCICFVPHHLVQGPWTLTVLEMWRREDCVFRRAVNDAHQITLSLMGLN
CTLDPIIYCFLTKKFRKFLTQRLSRWKSTRRSIRTTFSETNTDGDMALHTIYSA
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaattcatttgacggtaacatctcacattcaactgtcactggctctgcttacaacacc
aacagcagctgccagattgatgcagaattcagatacacactgcttcctattgtctacagt
cttgtcttcatcctaggactcattggaaactgctatgtgctgtgggtttttaaacggatg
actcctgcaaagagcatgactgagattaaaatcttcatggtgaatctgagtgttgctgac
ctactgtttatcttggcgctccctttttgggtagtgtactacagcactaaaggaaactgg
atctttggagacatcccctgcagggtggctggctgtctattttttatcaataactactgt
tccattgtgttcctctcagtgatcagttataacagatactgtgctgtggcatatcctgtt
gagacagttcagtacaatggcagaaagagaggctttattatttcaacaattatctggact
gtagttgttggcagcgcaattcccttcctttgccaacgtggaaccaacgaagttggtggc
gtcactcattgcttcgaaggatatgatatgaattcagccttacctgtggtcatcatccaa
tttatcttgattggagctttcttcattgcctttcttgtaacaatcatctgcaacttcctc
atcctaaacctgctatcgacaaaagcagcccagccgagcaggagtgaaaaggtgaagaag
caagctttccgcatggtgtgtgctgtcatcactgtattctgcatctgctttgtcccccat
catctggtccaaggcccctggaccctcactgtccttgaaatgtggcggcgagaggactgt
gtgttcagacgggcagtgaatgatgcccatcagatcacgctgtctttgatgggtctgaac
tgtacactggatcctatcatttactgctttctgaccaagaaatttaggaaatttttgaca
caacgtctcagtagatggaaaagtaccaggaggagcattaggactactttctcagaaacc
aatacggacggagatatggctttacataccatatacagcgcataa
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