Rhincodon typus (whale shark): 109918539
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Entry
109918539 CDS
T06055
Name
(RefSeq) paired box protein Pax-2 isoform X1
KO
K15608
paired box protein 2
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109918539
04131 Membrane trafficking [BR:
rtp04131
]
109918539
03036 Chromosome and associated proteins [BR:
rtp03036
]
109918539
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
109918539
Membrane trafficking [BR:
rtp04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
109918539
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
109918539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
HTH_32
DUF6115
Homeodomain
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
109918539
NCBI-ProteinID:
XP_048472379
LinkDB
All DBs
Position
34:complement(3084324..3303943)
Genome browser
AA seq
447 aa
AA seq
DB search
MDIHCKADPFSAMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVS
HGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAE
GICDNDSVPSVSSINRIIRTKVQQPFHPSPDGPATAVAAPGHTIDISSHWAADLLGTSCP
PIPCSRGLYSRLNLDIPSTNSPPVSSASNDPVGSYSINGILGIPRSNGEAKRKRDEVCVL
FLLDTQDASGPNGDSQGTAESVRKQLRSEAFAQQQLEALERVFERQHYSDVFNAGEHIKS
EQANEYSLSALASGLEDVKSSLSAAATPDLGTNVSGPQSYPVVTGRDMASTTLPGYPPHV
PPTGQGSYSTSTLAGMVPGSEFSGNPYTHPQYTTYNEAWRFTNPGLLMPHPGVLHPPLLP
LPMTATSYYGNHMKLQDESLGLHIVPV
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggatatacattgtaaagcagatccattctcagctatgcacaggcatgggggtgtgaat
cagctgggaggagtatttgtgaacggcaggccccttcccgacgtggtgagacaacgcatc
gtagaacttgcacaccagggagtcagaccctgtgacatctctcggcaactgcgggtcagc
cacggctgtgtcagcaagatactgggcaggtactatgagacgggcagcatcaagcccgga
gttatcggcggctcaaagcccaaagttgcgaccccgaaagtcgttgataagatagcggaa
tacaagcgccagaatccaaccatgttcgcttgggagattcgcgaccgactattggccgag
gggatctgtgacaatgacagtgtgcccagtgtcagctccatcaacaggatcattcggacc
aaagtgcagcagccttttcatccctcaccggatgggcccgccacagcagtcgctgcacca
ggccacacaatagatatttcctctcactgggctgcagatcttttgggaaccagctgccct
ccaataccttgctcgagaggcctttattcacgtctgaaccttgacatcccaagcacaaac
tctccgcctgtgtcctcagcctccaatgatcccgtgggatcgtactccatcaacggtatt
ctgggcattccacgatcgaatggcgaggccaagaggaaacgagatgaagtttgtgtcctc
ttcctgttagatacccaggatgcctccgggccgaacggtgattctcagggaactgcggag
agtgtacggaagcagctgcggagcgaagcatttgcccaacagcagttggaggccctggaa
cgcgtctttgagcggcaacactattcagacgttttcaatgctggcgaacatatcaaatca
gagcaggctaatgagtattccctctctgccctggcctctggattggaagatgtcaaaagc
agcctctcagccgcggccacccctgaccttgggaccaacgtttcaggaccccagagctac
cctgttgtgacaggccgtgatatggcaagtacaactttacctggctaccctccacatgtt
ccaccgactgggcagggcagctactccacctctacactggctggcatggtaccaggtagt
gaattttcgggaaacccttacacccatccacagtacacaacctacaatgaagcctggcgt
ttcactaacccgggattactaatgccgcatccaggggtgctgcaccccccactgctgcca
ctgcctatgaccgccactagttactatggcaaccacatgaaactgcaagatgaatctctt
gggctccacattgtaccagtctga
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integrated database retrieval system
