Rhincodon typus (whale shark): 109918578
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Entry
109918578 CDS
T06055
Symbol
cnot9
Name
(RefSeq) CCR4-NOT transcription complex subunit 9 isoform X1
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109918578 (cnot9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtp03019
]
109918578 (cnot9)
Messenger RNA biogenesis [BR:
rtp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109918578 (cnot9)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
109918578
NCBI-ProteinID:
XP_020374092
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All DBs
Position
7:complement(95578988..95593623)
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AA seq
298 aa
AA seq
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MHSLGAGAPVTALAQVDREKIYQWINELSSPETRENALLELSKKRESVPDLAPMLWHSFG
TIAALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYP
FLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTV
ATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSD
NPRAREALRQCLPDQLKDTTFAQVLKDDTTTKRWLAQLVKNLQEGQVTDPRGIPLPPQ
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgcacagcctgggggcaggggcgccggttactgcgctggctcaggtggatcgcgagaag
atttaccagtggatcaacgagctgtccagccctgagacccgggaaaatgccttgttagaa
ctcagcaagaagagggagtcggtgcctgacctggcccccatgctctggcactcttttgga
accattgctgccctcctacaggagattgtaaatatttatccatctatcaaccctccaact
ctgacggctcatcagtccaaccgcgtgtgtaacgcactcgcgttgttacaatgtgtagca
tcgcacccagaaaccaggtcagcatttctagcagctcatatcccactctttctctatccg
ttcttgcacactgtcagtaagacgagaccctttgagtatctgcgactcaccagcctgggt
gttataggcgccttagtgaaaacagatgaacaggaagtcatcaacttccttttgacaaca
gaaattattcctctctgtctccggataatggagtcaggaagtgaattgtccaaaacggtt
gcaacttttattttacagaaaatcctgttggatgacacaggactggcttacatctgtcag
acatatgaacgattctctcatgtggccatgattctgggtaagatggtgctgcagctgtcc
aaagagccatcggccagattattgaagcatgttgttcgctgctacctccgtctctctgac
aatccacgggcaagggaggcactccgacagtgcttgcccgaccagctgaaagataccacg
tttgcccaggtgctgaaggacgatactactaccaaacgttggctggcccaactcgtcaag
aacctccaggaggggcaggtgactgacccccggggaatccccctcccaccccagtga
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