Rhincodon typus (whale shark): 109918628
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Entry
109918628 CDS
T06055
Symbol
nup93
Name
(RefSeq) nuclear pore complex protein Nup93
KO
K14309
nuclear pore complex protein Nup93
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109918628 (nup93)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtp03019
]
109918628 (nup93)
Messenger RNA biogenesis [BR:
rtp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109918628 (nup93)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
109918628
NCBI-ProteinID:
XP_048461657
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Position
15:complement(49151218..49298647)
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AA seq
820 aa
AA seq
DB search
MDVEGFDELLQQAEQLAAETEGVSELPHVERNLQEIQQAGEVLRSRTLTRTSQETADVKA
SILLSSKGLDISHISQRLESLSAATTFEPLEPVKDTDIQGFLKNERDNALLSAIEESRKR
TFAMAEKYHWESMLVEWEHEKQKILHTLLTSGEDALDFTQEAEPSFVSEMGPPGRSAMDS
VEVAYARQIYIYNEKVVNGHLQPNLGDLCSTVAESLDDKNVSELWAMVKQMTDVLLVPAA
DALKSRTSLEMQMAFVRQGLNFLEQSYKNYVMATVYGNLHQAQLGGVPGTYQLVRSFLNI
KLPAPLQGLQDGEVEGQPVWALIYYCLRCGDLMAALQVVNRAQHQLGEFSNWFQEYVQGD
DRRLPPTTENKLRLHYRRALRNSTDPYKRAVYCLIGRCDVTDNHSEIADKTDDYLWLKLN
QVCFDDDGSSSPQDRQTLPQLQSQLLEEYGETHFAANRHPFLYFQVLFLTAQFEAAIAFL
FRMERLRCHAVHVALVLYELKLLLKSSAQSAQLLSQDSADPRPIRRLNFIRLLMLYTRKF
EPTDPREALQYFYFLRNEKDSQGENMFMRCVSELVIESREFDMLLGRLEKDGSRKPGVID
KFAGDTRAVISKVATVAENKGLFEEAVKLYDLAQNPDKVLELMNKLLSPVIPQISAPQSN
KERLKNMALAVAERYRNRGVAAEKSVDSTFYLLLDLITFFDEYHSGNIDRAIDVMERLKL
VPLSQECVEERVAAFRNFSDEIRHNLSEVLLATMNILYTQYKRLKGTSPATPTRPQRAVE
DRDLQLRSQARALITFAGMIPYRMAGDTNARLVQMEVLMN
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggatgtggaaggtttcgacgagttgttacagcaagctgagcagcttgcagcagaaact
gaaggggtgtctgagcttccacatgtagaaagaaacctgcaggagattcagcaggctgga
gaggtcttgcgatcaaggaccttgacacgcacgtcacaggaaacagcagatgtcaaagcg
tccattctgctgagttctaaaggattagatatctctcacatttctcaacgattggaaagt
ctcagtgcagctacaacttttgagcctcttgaaccagtgaaggacacagatatacagggt
tttctgaagaatgagcgtgataatgcactgctgtcagctattgaagagtccaggaagagg
acatttgcaatggcagagaagtatcactgggagtccatgctggtggaatgggaacatgaa
aaacagaagatcctccatacgcttctgacatcaggggaggatgctcttgatttcactcag
gaagcagagccaagttttgtcagtgaaatgggaccaccaggacggagtgcaatggacagt
gtggaagtggcatatgctcggcagatctatatatataatgagaaggtggtgaatggacat
ctacagccgaacctaggggacctttgcagcactgtagctgagtctttggatgacaagaat
gtctctgaactgtgggcaatggtgaagcagatgactgatgtgctgttggtacctgctgct
gatgcactgaagagccgtactagtttggaaatgcaaatggcatttgtaaggcaggggcta
aattttctggagcagagctacaagaactatgtaatggcaactgtctatggaaacctgcac
caggctcaattaggtggtgtacctggaacttaccaattagtccgtagttttcttaatatt
aaactgccagctcccttgcaagggcttcaggatggtgaggttgaaggccaaccagtctgg
gccctcatctactactgtttacgttgtggagacttaatggcagcactgcaggtggtgaac
cgtgcacagcatcagctgggggagtttagcaactggttccaagagtacgttcagggtgat
gaccggaggttgcctcccacaacagagaataaactgcggctacattaccgacgtgctctg
cgaaacagcacagatccgtataaaagagcagtctactgtctgattggtcgatgtgatgtt
actgacaaccacagtgaaatagctgataaaacagatgactatctctggttaaagctgaat
caagtatgttttgatgatgatggtagcagctctcctcaggacaggcaaaccctgccacag
ttgcagagccagctgctggaagaatatggtgaaacccactttgcagccaaccggcatcct
ttcctgtacttccaagtccttttccttacagcccaatttgaggcagctatcgcctttctc
ttccgcatggaacgactgcgttgtcatgcagtgcatgtggccctggttctttacgagtta
aaacttcttctgaaatcgtctgcccaaagtgcacagctgttgagtcaggacagcgctgat
ccccgtccaatacgacgtcttaatttcatccgtttgctaatgctgtacaccagaaaattt
gaacccactgatcccagggaagcactccaatatttctatttcctcaggaatgagaaagac
agtcaaggagaaaacatgttcatgagatgtgtcagtgaacttgtcattgaaagtcgagag
tttgatatgctgcttggccgattagaaaaggatggcagtcgaaagcctggtgtaattgac
aagtttgctggtgacacaagagctgttatcagtaaagtagctaccgtggctgaaaataaa
ggcctatttgaggaggctgtgaaactttatgacctggcccagaatcctgacaaggtcctg
gagctgatgaacaaactgttgagccctgtgataccacagataagtgcaccccagtctaat
aaagaacgattgaaaaacatggcacttgcagtagctgagcggtatcggaatcggggtgtt
gctgcagaaaagtcagttgacagcactttctaccttcttctggacctaattacctttttt
gatgaataccattctggcaatatcgatagagcaattgacgtcatggagagactgaaactc
gtgccgctcagtcaggaatgtgttgaggagagagtggcagctttcagaaatttcagcgat
gagattcgacataacttgtcggaagtgctgcttgccaccatgaatattctttatacccag
tacaagagactgaagggcacaagcccagccaccccaaccagacctcagcgtgcggtggag
gatagagacttgcaactcagaagccaggcacgtgccctgataacattcgctggaatgata
ccatatagaatggctggtgatactaatgcacgcctagtacagatggaagtcctcatgaac
tga
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