Rhincodon typus (whale shark): 109918637
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Entry
109918637 CDS
T06055
Name
(RefSeq) gastrula zinc finger protein XlCGF7.1-like
KO
K09191
general transcription factor IIIA
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109918637
03021 Transcription machinery [BR:
rtp03021
]
109918637
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
109918637
Transcription machinery [BR:
rtp03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
109918637
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_15
zf-C2H2_6
C2CH-3rd_BIRD-IDD
zf_UBZ
zf-C2H2_16
Zap1_zf1
zf-LYAR
DUF7630
zf-C2HE
zf-met
zf_DPOE_2
zf-C2H2_ZN142
Zn_ribbon_8
zf-C2H2_CASZ1
zf-C2HC_2
DUF2180
B129_C2H2-zf
Zn_ribbon_SprT
Cas12f1-like_TNB
DUF7479
DUF7836
Motif
Other DBs
NCBI-GeneID:
109918637
NCBI-ProteinID:
XP_048476917
LinkDB
All DBs
Position
49:1982560..1987161
Genome browser
AA seq
224 aa
AA seq
DB search
MNKSWKCGHCGEGFPSPSALDIHERRHTGERPFTCFVCEKGFISVSNLLRHQQVHTVERP
FTCAVCGKGFSDSHNLLQHQRIHTGERPFTCSQCGKGFTQLSNLHVHQRVHTGEKPFTCS
QCGKGFTQLSNLQAHQRVHTGEKPFTCSQCGEGFSRLSNLQKHQRVHTGERPFICSQCGK
GFTQSSHLQKHQQIHTKEKLFTCSQCGKEFTRLSSLQKHQRGHE
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatcctggaaatgtggacactgtggggagggattcccttccccatctgcactt
gacattcatgagcgcagacacactggggagaggccattcacctgttttgtgtgtgagaaa
ggattcatttctgtctccaatctgctgagacaccagcaagttcacactgtggagaggcca
tttacttgcgctgtgtgtgggaaaggattctctgattcgcacaatctgctgcaacaccaa
cggattcatactggggagaggccattcacctgctctcagtgtgggaagggattcacacaa
ttatctaacctgcatgtacaccagcgagttcacactggtgagaagccattcacctgctct
cagtgcgggaagggattcacacagttatccaatctgcaagcacaccagcgggttcacact
ggggagaagccatttacctgctctcagtgtggggagggattctctcgattgtccaatctt
cagaaacaccagcgagttcacactggggagaggccattcatctgctctcagtgcgggaag
ggtttcacacagtcatcccacctgcagaaacaccagcagatccataccaaggagaagctg
tttacctgctctcagtgtgggaaggaattcactcgattatccagcctgcagaaacaccag
cgaggtcatgagtga
DBGET
integrated database retrieval system
