Rhincodon typus (whale shark): 109918706
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Entry
109918706 CDS
T06055
Symbol
gtf2e2
Name
(RefSeq) transcription initiation factor IIE subunit beta
KO
K03137
transcription initiation factor TFIIE subunit beta
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109918706 (gtf2e2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtp03021
]
109918706 (gtf2e2)
Transcription machinery [BR:
rtp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
109918706 (gtf2e2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_beta
TFA2_Winged_2
EF-hand_11
TFA2_E-tether
PhoQ_Sensor
Motif
Other DBs
NCBI-GeneID:
109918706
NCBI-ProteinID:
XP_048453647
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All DBs
Position
1:142761629..142803121
Genome browser
AA seq
287 aa
AA seq
DB search
MDPALLKERELFKKRALSTPAIEKRKVSSSSSSSSSKKKKLKPDQGNSSKQSSENASFAY
RALPGSAGYKFGVLAKIVNYMKTRHQRGDTHPLTLDEILDETKLLDIGMRQKQWLMTEAL
ISNPKIDITDGKYAFKPKYNLKDKKALLRLLDKHDQRGLGGILLEDIEEGLPNAQKAIKV
LGDQIIFVTRPDKKKILFYNDRTCQFTMDEEFQKLWRSIPVDSMDEEKIEEYLKKQGISS
MQETGPKKVVCVQKRKKPASQRRKFKTRNDHLAGILEDYTEGVSSKD
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggatccagcattgttgaaagaaagggaactgtttaagaagcgtgctctttctactcct
gctattgagaaacgaaaagtctcttcctcttctagttcatctagttctaaaaagaagaaa
ttaaagccagatcagggcaattcctcaaaacaaagttcagaaaatgcatcttttgcctat
agagcacttccagggagtgctggatacaaatttggtgtacttgctaaaatagtcaactac
atgaagacccgccaccagcgaggagatacccatccactgacgctggatgaaattctagat
gagactaaactcttggatattggcatgagacaaaaacaatggttgatgactgaggcattg
ataagcaacccaaaaattgatataacagatgggaaatatgcctttaaacccaaatacaac
ttaaaagataaaaaggctcttctgaggcttttggacaagcatgatcaacgaggtttggga
ggaatcctcctggaagatatagaggaaggcctaccaaatgcacagaaagctataaaggta
ttaggggatcaaattatttttgtgacaagaccagacaagaagaagattctcttctataat
gacagaacctgccagtttacaatggatgaagaatttcagaagctatggaggagtattccg
gtggattcaatggatgaagagaagattgaggagtatttgaaaaagcagggcatttcctca
atgcaggagacaggaccaaagaaggtggtatgtgttcagaaaaggaaaaaacctgcttct
cagagaagaaaattcaagacacgcaatgaccatctggcaggaatactggaggactatact
gaaggagtatctagcaaagactaa
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