Rhincodon typus (whale shark): 109918729
Help
Entry
109918729 CDS
T06055
Symbol
nup50
Name
(RefSeq) nuclear pore complex protein Nup50
KO
K14295
nuclear pore complex protein Nup50
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109918729 (nup50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtp03019
]
109918729 (nup50)
Messenger RNA biogenesis [BR:
rtp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109918729 (nup50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP50
Ran_BP1
EVH1_PP4R3
SHPRH_helical-2nd
Motif
Other DBs
NCBI-GeneID:
109918729
NCBI-ProteinID:
XP_048463668
LinkDB
All DBs
Position
18:16771705..16814768
Genome browser
AA seq
459 aa
AA seq
DB search
MAKRTADKELTDRNWDQEEESEEAGTFSVASEDVLKNRAIKKAKRRNVLTESDGGGVFKG
FSGLTSTGNTGFGGFGNGSGFKPLQGLSNGSNASSSSSTSALSCATDVNDAVGSSLSNGP
PSNPLAKGEIGTKTNGINQLNTRSKMGCNEYNKQLAALNCSVRDWITKHVNENPLCDLTP
IFRDYEKHLTSIEQKYGSSSDSGSESDTSSKRSEMQSGNTFGVSKTLPETTPAPIFSAVK
TNDVIPLPSEMKPETTIGNNGNSSFLFGKTVEKPPSTGFSFSSGTSCSLFGKDLNQEKSG
APTFSFTASVGKPEEINSSEHKDEKDEENEEPPKPIVNEIKEDDAIFSKKCKLFYKKDGD
FKEKGIGTIHLKPVTDQKIQLLVRADTNLGNILLNIMLHPSLPCTRTGKNNILIVCIPNP
PIDEKNPDTAVPILIRVKTTEDADELHKIITEKKLAHQV
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagagaactgcagacaaggaactaactgaccgaaattgggaccaggaagaagaa
tctgaagaggcaggtactttctcagttgcaagtgaagatgtgttgaaaaacagagctatc
aaaaaagcaaaacgtagaaatgttctcactgagtctgatggtggtggagttttcaaagga
ttctctggtcttacttcaactggaaatactggttttggaggatttggaaatggatctggt
ttcaagcctttgcaaggattatccaatggaagcaatgcatcatcgtcctcttcaacgtct
gcccttagttgtgctactgatgtaaatgatgcagtggggtcttctctgtctaacggtcct
ccatcaaaccccttggcgaaaggtgaaataggtacaaaaacaaatggtattaatcaactt
aacactcggagtaaaatgggctgtaacgaatacaacaaacaactagcagcactaaattgt
tcagtccgggattggatcactaaacatgtcaatgagaatccactctgtgatttgactcca
atcttcagggactacgagaagcatttgacgagcattgaacagaaatatggcagcagctct
gatagtggttcagagagtgacacaagcagcaagaggtcagaaatgcaatctggtaacaca
tttggtgtttccaaaacattaccagagacaaccccagcacctatcttttcagctgtcaaa
accaacgatgttattccactcccttcagaaatgaaacccgagactacaataggaaataat
gggaacagcagcttcctctttgggaagacagtggaaaagccaccttcgactggcttttct
ttcagtagtggtacctcatgctcgttatttgggaaagatctaaaccaagaaaagtctgga
gctccaacgttttccttcacagcatctgtaggaaaaccagaagaaataaacagcagtgag
cataaagatgaaaaagatgaagagaatgaagaacctcccaaaccaattgtgaatgaaatc
aaagaagatgatgcaatcttttccaagaagtgtaaactgttctacaagaaagatggggat
ttcaaagagaagggaattggtacaatccatttgaaacctgtgacagatcaaaagatccaa
ttgttggtgcgagcagatacaaatcttggaaatattttactgaacattatgcttcatcca
tcattgccttgtacaaggacaggaaagaacaacatccttattgtttgcattcccaaccct
cccattgatgagaagaaccctgacactgctgttccaattttgatccgtgtgaaaaccact
gaagatgcagatgagctacacaaaattataactgagaaaaaacttgcacatcaagtgtaa
DBGET
integrated database retrieval system
