Rhincodon typus (whale shark): 109918752
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Entry
109918752 CDS
T06055
Symbol
slc6a5
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 2
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
109918752 (slc6a5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtp02000
]
109918752 (slc6a5)
Transporters [BR:
rtp02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
109918752 (slc6a5)
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Gene cluster
GFIT
Motif
Pfam:
SNF
PIRT
Motif
Other DBs
NCBI-GeneID:
109918752
NCBI-ProteinID:
XP_020374282
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Position
17:complement(55749366..55811074)
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AA seq
848 aa
AA seq
DB search
MSDVSAFDNARINLKGMVFYLARVDGGAVRGAEASYKGKATPKYLHIALHPQGSDSSLAL
ALSGALMDCTQQEGMTKPIVSIAESSSPGQPSRIDAVGVTTTSLETEAAGGLQAAVPGSQ
TAESKAVSLKEAQSNGSEGDKFGICKNESAQPNSVVHQDSIEMLPRKDTAVESNERTNTV
YCKIAEVEVSYGTGIPTIQQNNAKGSWVTKCQSTVLLGTDGNTAVFPGTVSGEDKGDENK
ARGNWSRKLDFILSMVGYAVGLGNVWRFPYLAFQNGGGAFLIPYLMMLAFAGVPIFFLET
ALGQFASQGPISVWKAIPALQGCGLAMLIISVLIAVYYNIIICYTLFYLFASCIPVLPWA
SCENRWNTANCRDKHKLLLDSCIIGDTNSVQIKNSTFCLSAFSNVTMVNYTRPINKTFVS
GSEEYFKYFVLKISDGIEYPGEIRWELAMTLLLAWIIVYLSLAKGIKSSGKVVYFTATFP
YVVLVILLIRGITLPGAGDGIWYFITPNWDKLKDAKVWKDAATQIFFSLSAAWGGLITLS
SYNKFHNNIYRDTLLVTCANSATSVFAGFVIFSVIGFMAKELKVPITEVADEGPGIAFVV
YPEALTRLPLSPFWAIIFFLMLLTLGLDTMFATLETIVTSVVDEFPGYLRPKKPLFTLVC
CVVFFFMGIPMVTQGGIYMLQLVDTYAASYSLVIIAIFELVGVSYIYGLKRFCEDIEMMI
GFQPSYFWRICWAFVTPTILTFILCFSFYQWEPMTYENYRYPAWSMVMGWLMLACSVIWI
PIMFVIKMHLAPGSFIERLKLVCSPQPDWGPFLTQHRAERYKNMMDPLGTSSLGLKLSPK
DMELGSQF
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgtaagtgcgtttgacaatgccaggattaatttgaaagggatggtattttac
ctggcgcgggtggacggtggagctgtccgcggtgctgaagctagctacaaagggaaagcg
acgccgaaatacctgcacattgctctacatccccaaggctccgattcctccctggcgctc
gctctatcaggagcgctgatggattgcacacagcaggaaggcatgaccaagccaatagtc
agcattgccgagagttcgtccccggggcagcctagtagaatagatgccgttggggtaacg
acgactagcctggaaactgaagcagcagggggactccaggccgcggtgcccggctcccaa
accgccgaaagcaaagccgtctctctcaaagaagcccagtccaatggttcggagggggac
aagtttgggatctgtaagaatgagtccgctcagcccaattccgtcgtccatcaggattct
atcgaaatgttaccccgcaaggatactgcagtggagagcaatgaacgcaccaacacggtt
tactgtaaaatcgccgaggtggaggttagctacggcactgggatccccacaatccagcaa
aacaacgccaagggcagctgggtcacaaaatgccagagcacggtgttactgggaacagat
ggaaataccgccgtattccccggcactgtcagcggggaagataaaggagatgagaataaa
gccagagggaactggtcgaggaagctggacttcattctctccatggtcggctatgcggta
ggactggggaatgtatggcgttttccctatctcgcattccaaaacggcggaggtgcattt
ctgattccctacctgatgatgcttgcttttgctggagtccccattttctttctggaaaca
gcacttggccaatttgccagtcaaggccctatatccgtgtggaaagctattcctgcctta
caaggatgtggactcgctatgttaatcatctcagttttgattgctgtgtactacaacatc
atcatatgctacactctcttctacctttttgcatcgtgcatacctgtccttccctgggca
tcctgcgaaaatagatggaacactgcaaactgtagagacaagcacaagctgttattggat
tcctgcataattggagataccaacagtgtgcagattaaaaattcaacattttgcctttct
gctttttccaatgtcaccatggtgaactacaccaggccaataaacaaaacctttgtcagc
ggcagtgaagaatacttcaagtactttgtcttaaagatttctgacgggattgaatatcct
ggggaaataaggtgggagttagcaatgactctgttactggcctggataattgtctatcta
tccctggcaaaaggaataaaatcatcaggaaaggttgtctacttcacggccaccttcccc
tatgttgtccttgtcatccttctaatccgagggattactttgccgggtgctggagatgga
atctggtacttcattacacccaactgggataagcttaaggatgctaaggtgtggaaagat
gcagcaactcaaattttcttttctctctctgctgcctggggaggactgataacactctcc
tcatacaacaagttccacaataacatttacagggacactctgttagtgacttgtgccaac
agtgccacaagtgtctttgcaggcttcgtcatcttctcagtcattggcttcatggccaag
gaacttaaagttcccatcaccgaggttgcagatgaaggtccaggtattgcatttgtagtg
tatccagaagctctaaccagactgccattatcaccattctgggctatcattttctttttg
atgcttttaacacttggattggacacaatgtttgcaacccttgagaccattgtgacttca
gtagtggatgaattccctggatacctgagacctaagaagcctttgttcacattagtctgt
tgtgtggttttcttcttcatgggtattcccatggtaacccagggtggaatctacatgcta
cagctggtagacacatacgcagcctcctattccctggtcatcatagcaatatttgaacta
gtgggagtttcatacatatacggcttgaaacggttttgtgaagatatcgagatgatgatt
ggattccaacctagctatttctggagaatttgttgggcctttgtcactcctacaattctt
acattcatcctttgcttcagcttttaccagtgggagccgatgacatatgaaaattacaga
tatccagcttggtcgatggtgatgggatggttaatgctggcctgctctgtcatatggatc
ccgatcatgttcgtgattaagatgcatttggcccctggttcctttatagagaggcttaag
ctggtgtgcagcccccaacccgactggggtccattcctaactcagcaccgtgcagaacgc
tacaagaatatgatggacccccttgggacctcttctcttggactcaaactgtcacccaaa
gacatggaattaggatctcagttctag
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