Rhincodon typus (whale shark): 109918889
Help
Entry
109918889 CDS
T06055
Symbol
snrpf
Name
(RefSeq) small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109918889 (snrpf)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtp03019
]
109918889 (snrpf)
03041 Spliceosome [BR:
rtp03041
]
109918889 (snrpf)
03032 DNA replication proteins [BR:
rtp03032
]
109918889 (snrpf)
Messenger RNA biogenesis [BR:
rtp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
109918889 (snrpf)
Spliceosome [BR:
rtp03041
]
Complex A
U1 snRNP components
Sm proteins
109918889 (snrpf)
U2 snRNP components
109918889 (snrpf)
Complex B
U1 snRNP components
109918889 (snrpf)
U4/U6.U5 tri-snRNP components
109918889 (snrpf)
Complex C
U2 snRNP components
109918889 (snrpf)
DNA replication proteins [BR:
rtp03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
109918889 (snrpf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
109918889
NCBI-ProteinID:
XP_020374427
LinkDB
All DBs
Position
22:2810518..2828594
Genome browser
AA seq
86 aa
AA seq
DB search
MSLPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALAGHLG
EVLIRCNNVLYIRGVEEEEEDGEMRE
NT seq
261 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaccattgaatccgaaacctttcctcaatgggttgactggcaaaccggtgatg
gtgaagttaaagtggggaatggagtacaaaggttacttagtgtcagttgatgggtatatg
aacatgcagcttgcaaacacagaagaatatattgatggagcgttagcgggtcatcttgga
gaagtcttaatcagatgtaacaacgttttgtacattagaggagttgaggaggaggaagaa
gatggagaaatgagagagtaa
DBGET
integrated database retrieval system
