KEGG   Rhincodon typus (whale shark): 109918939
Entry
109918939         CDS       T06055                                 
Symbol
ciao1
Name
(RefSeq) probable cytosolic iron-sulfur protein assembly protein ciao1 isoform X1
  KO
K24730  cytosolic iron-sulfur protein assembly protein CIAO1
Organism
rtp  Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rtp03036]
    109918939 (ciao1)
   03400 DNA repair and recombination proteins [BR:rtp03400]
    109918939 (ciao1)
Chromosome and associated proteins [BR:rtp03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    109918939 (ciao1)
DNA repair and recombination proteins [BR:rtp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     109918939 (ciao1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 ANAPC4_WD40 Beta-prop_IFT140_1st EIF3I Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_Vps41 Beta-prop_EIPR1 NBCH_WD40 eIF2A WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_DCAF12 Beta-prop_ELP1_1st Beta-prop_TEP1_C B-prop_COPA_B_2nd Beta-prop_SCAP Beta-prop_HPS5 WD40_RFWD3 Beta-prop_SPT8 Beta-prop_NUP159_NUP214 PROPPIN
Other DBs
NCBI-GeneID: 109918939
NCBI-ProteinID: XP_020374474
LinkDB
Position
40:7435311..7441186
AA seq 337 aa
MKWRLTLESRFSAHPDSRAWYVAWSPSGTLLASCGGDRAVRIWAREGASWLCKCLLEDGH
QRTVRKVSWSPCGTYLASVSFDATTCIWRKKEAAFELLTTLEGHENEVKSVAWAPSGNLL
ATCSRDKSVWVWEVDEDDDYECVSVLNAHTQDVKHVIWHPNGEFLASGSYDNSIKLYKEE
DDDWVCVNTLEGHESTVWSIAFDKTGEHLVSCSDDKTVKIWKAYRPGNEQGVICSGSDLS
WKCICTLSGFHSRPIYDISWCHMTDAIATACGDDAIRIFEKDPNSDPHQPTFSLTAHIPK
AHTQDVNCVAWNPKQAGLLASCSDDGDIAIWVYTFED
NT seq 1014 nt   +upstreamnt  +downstreamnt
atgaagtggcggttgacgctcgagtcccgcttctccgcgcatcccgactcccgggcctgg
tatgtggcctggagcccgagcggtacgctgctggcttcgtgtggaggcgatcgggcagtg
cgtatctgggccagagaaggggcctcctggctgtgcaagtgcctcctggaagatgggcac
cagcggaccgtgcggaaggtctcttggtcgccctgcggtacctacctggcttcggtcagc
ttcgacgccaccacctgcatctggaggaagaaagaggccgcatttgagcttttgacaaca
ctggaaggacacgagaatgaagtgaaatctgtcgcctgggctccatctggcaatctcctt
gcaacttgcagccgggataaaagtgtatgggtttgggaagtggatgaagatgatgattat
gagtgtgtgagtgtactgaatgctcatacccaggatgtcaaacatgtaatctggcatcca
aatggagagttcctggcttctggaagctatgataatagcattaagctatataaggaggaa
gatgatgactgggtctgtgttaacactcttgaaggtcatgagtctacagtttggagcatc
gcatttgataaaacgggagagcatttggtatcttgcagtgatgacaaaactgttaaaatc
tggaaagcttacaggcctggcaatgaacaaggtgtgatatgcagtggatcagatctttct
tggaaatgtatctgcactctatctggcttccacagtcgccctatctatgacatttcttgg
tgtcacatgacggatgcgatagcaactgcatgcggtgatgatgcaatccggatatttgag
aaggaccctaattcggacccacaccaacccaccttttcactcacggcccacattccaaag
gcacacactcaggatgtcaactgtgtggcttggaaccccaagcaggcagggttgttggca
tcctgcagtgatgacggggacattgctatctgggtgtacacgttcgaagattag

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