Rhincodon typus (whale shark): 109918947
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Entry
109918947 CDS
T06055
Name
(RefSeq) 2-5A-dependent ribonuclease
KO
K01165
ribonuclease L
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04621
NOD-like receptor signaling pathway
rtp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
109918947
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109918947
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_5
Ank_3
Pkinase
Ribonuc_2-5A
ANK_LRRK2
PK_Tyr_Ser-Thr
Kdo
DUF7295
Motif
Other DBs
NCBI-GeneID:
109918947
NCBI-ProteinID:
XP_020374483
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Position
10:complement(2546313..2573568)
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AA seq
814 aa
AA seq
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MAEQEREQTIEDIGTELGNNFRDLCESNNPDPCQAETLIREGALENLSVDTIGSILCKVA
MKGHEEIMKKLLLSDKVDVNYQEPEYKWSPLLNAVQAEHERIVDLLLEHGADPKLQKKNG
ASPFIVAAIIGNVNLLSKFLGLGADIDEADGNGFTAFMEAAQYGHEEALRFLFQEKADVN
KHRMVSEARANIGKGGKTALIDAVLNKREDIVVILLDEMKADVNAFDNLGKTPLIHALES
GNWEIVEILLKRGADVNARDKNQNTPLSIALTNCSPDSPLLEQLVKCTQDLNVQDGHGKT
PLIRAVEKKMSMVVKLLLENEGTAINAQDHSGQTALLAAVENKDTSLTRMLCEKGADVSC
TNNHGDTALMIAIRKYDNKTKNILIKHGAEKVASNVGTPPSKWKEHSQRWKIILGKLQRE
PRGPIGKLKLSRIPDYKIREELNVTEVYLGFVNNETEVAVKCHRKGVEGAKRELDCLRDP
KINGSSRFANLLHCESDDYCDYLCLNLCEYNLEECVSEWPDKMRGDAPKIMKQLVQALQL
LHKVKFAHRDLHPTNVLRDVEENFRLGDFDKCVHFDKNPAVPICSGTWEASEILQKLERL
PKATFTEDELVKADVQALGRLLHFVMSGGKDAYGSKKDVLDNNPTLDDCLLDPKHAEARD
FVERLLAPAEQRATLTEIEHHPLLWKDLDKAQFVQSLANKKDVVTRNYDSRIVQILNETG
ADQERSFHKWTQKVDPVLLNDMNKKQGKNKEYKDATSDLLKFIRNLIQHFDEKKEFHSLM
KSPEDYSFGLFPDLIIALYKALKGTEWEKYFPKE
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggcagaacaagaaagggaacaaacaattgaagacattggaaccgaactgggtaataac
tttcgagatctctgtgagtccaacaatccagacccctgtcaggctgaaacgttaattaga
gagggagccttggaaaatctcagtgttgacacgattggctccattttatgtaaagttgcc
atgaaaggtcacgaagaaatcatgaagaagttgcttttgagcgacaaggtagatgtgaat
taccaggagccggaatataagtggtcgcccctccttaacgccgtgcaagcggaacatgag
agaattgttgacttgctgttggaacacggagccgaccccaagctccagaagaagaatggc
gcctcgcctttcattgtcgctgcgataattggcaatgtgaatctgctcagcaagtttctc
gggctgggcgcggatatcgacgaggcagacggcaacggttttactgcctttatggaagca
gcacagtacggccacgaggaggcgctgcgcttccttttccaggaaaaggccgatgtgaac
aagcacaggatggtctctgaggccagggcgaatattggtaaaggggggaagacagccctg
attgatgccgtgttgaacaagcgtgaggacatcgttgtgatcttgttggatgaaatgaag
gcggacgttaatgcatttgacaacctcggcaaaacgccactcatccacgccttggagagc
gggaattgggagattgtggagattctgttaaagcggggagccgacgttaacgccagggac
aaaaaccagaacacgcctctgagcatcgcgttgaccaactgtagccctgacagccccctg
ttggaacagctcgtgaagtgcacacaggatctgaatgtccaggacggccatgggaaaaca
ccattgatccgtgcagtagagaagaagatgtcgatggtggttaaacttctgctggagaat
gagggcacggcaatcaatgcacaagatcattcgggccagacagccctactagcagctgtg
gaaaataaggatacctcgttgacacgaatgctgtgtgagaaaggggctgatgtatcctgt
acgaacaatcatggagatacggcgttaatgatagccataaggaagtatgacaataaaacc
aaaaatatactgatcaagcatggggcagagaaggtggcatccaatgtaggcacacctcct
tcaaaatggaaggagcacagccaacgttggaaaataatccttgggaagctgcagagggag
ccccgtggccccattgggaagctaaaactatccagaatccccgattataagattagagaa
gaactcaatgtgacggaagtctaccttggtttcgtcaataatgagactgaagtggcggta
aaatgtcacaggaagggtgtggaaggagccaaaagagaattggattgcctccgtgatccc
aagatcaatggcagcagtcgctttgctaacctcctgcattgtgaaagtgatgattattgt
gattatctctgtctgaacctctgcgagtataaccttgaggagtgtgtgagcgagtggcca
gacaaaatgcgaggggacgcccctaaaataatgaagcagttggttcaggctcttcagctc
ttgcacaaggttaagtttgctcaccgggatttgcatccaacaaatgtcctcagagatgtt
gaagaaaattttcgcctgggagattttgataagtgtgtgcattttgataagaatccagcc
gtgccgatttgctctgggacctgggaagcctcagaaatcctgcagaaactggaacgtttg
ccaaaggcaacgtttaccgaggatgagctggtcaaagcagacgtgcaggcactaggacgc
ctcttgcactttgttatgtctggcgggaaggatgcctacgggagtaagaaggatgtactt
gacaataaccctactttggacgattgtcttcttgacccaaagcatgctgaagccagagat
tttgtggagcgcttgttagcaccagcagagcagagagcgacactcactgagattgagcac
catccgctactgtggaaagatttagacaaggcccagtttgtccaaagtcttgccaacaag
aaggatgtggtcacccggaattatgacagtcggatcgtccagatcctgaatgagactggt
gcagatcaggaaagatcatttcacaagtggacacaaaaggtcgaccccgttctcctaaat
gacatgaacaaaaaacaaggcaagaataaagaatataaggatgccaccagtgacctcctg
aaattcataagaaacctcatccagcacttcgatgaaaagaaagagttccacagtttaatg
aagagtccagaagattacagctttgggttatttcctgacctgatcattgctctctacaag
gccctgaagggcacagagtgggagaagtactttccaaaagaatag
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