Rhincodon typus (whale shark): 109919106
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Entry
109919106 CDS
T06055
Symbol
eef1a1a
Name
(RefSeq) elongation factor 1-alpha 1a isoform X1
KO
K03231
elongation factor 1-alpha
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109919106 (eef1a1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtp03019
]
109919106 (eef1a1a)
03016 Transfer RNA biogenesis [BR:
rtp03016
]
109919106 (eef1a1a)
03012 Translation factors [BR:
rtp03012
]
109919106 (eef1a1a)
04131 Membrane trafficking [BR:
rtp04131
]
109919106 (eef1a1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtp04147
]
109919106 (eef1a1a)
Messenger RNA biogenesis [BR:
rtp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
109919106 (eef1a1a)
Transfer RNA biogenesis [BR:
rtp03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
109919106 (eef1a1a)
Translation factors [BR:
rtp03012
]
Eukaryotic type
Elongation factors
109919106 (eef1a1a)
Membrane trafficking [BR:
rtp04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
109919106 (eef1a1a)
Exosome [BR:
rtp04147
]
Exosomal proteins
Proteins found in most exosomes
109919106 (eef1a1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
109919106
NCBI-ProteinID:
XP_020374666
LinkDB
All DBs
Position
5:87850174..87870926
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETSKYYITIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRYEEIVKEVSTYIKK
IGYNPDTVAFVPISGWHGDNMLEASSNMTWFKGWKINRKEGNANGVTLLEALDSILPPQR
PTEKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPVNVTTEVKSVEMHHEALT
EAMPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAANFTSQVIILNHPGQIAAGYAPV
LDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMIPGKPMCVESFSEYPP
LGRFAVRDMRQTVAVGVIKAVERKATGAGKVTKSAQKAQKSR
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggaaaagatccacatcaacattgttgtcattggccatgtggattctggcaag
tccaccaccactggccatttgatctacaaatgtggtggcattgacaagagaaccattgaa
aagtttgagaaggaagctgctgagatgggcaaaggatccttcaagtatgcctgggtattg
gacaagttgaaggctgaacgtgaacgtggtattacgattgacatttctctctggaaattt
gaaaccagcaagtattatattaccattattgatgctcctggtcacagagatttcattaaa
aacatgattactggtacttctcaggctgactgtgctgtattaattgtggcggctggagtt
ggtgaatttgaagctggcatatctaaaaatggccagactcgggagcatgctcttctggcc
tacactctgggtgtgaaacagctcatcgttggagtgaataagatggattcaactgaaccc
ccatatagccaaaaacgatatgaagagattgttaaagaagtcagcacttatatcaagaaa
atcggttacaatccagacactgtggcatttgtaccaatctctggctggcatggtgacaac
atgctggaggctagttctaatatgacttggttcaaaggctggaagatcaaccgtaaggaa
ggtaatgctaatggagttactttgttggaggctttagattctatactaccaccacaacgg
ccaacagaaaaaccccttcgtcttcctctgcaagatgtctacaaaattggtggtattggt
actgtaccagtgggtcgtgttgaaactggtattctgaaacccggaatggtagttacattt
gcacctgttaatgtgacaacagaagtaaaatctgttgaaatgcaccatgaagccctgact
gaagctatgcctggtgacaatgttggcttcaatgttaagaatgtgtctgtaaaagatgtt
cgccgtggcaatgttgctggggatagcaagaatgacccaccaatggaagctgccaacttc
acttcacaagtaatcattttgaaccacccaggacagattgctgctggttatgctcctgtc
ttggattgccatactgctcacattgcttgcaagtttgctgagttaaaggagaagattgac
cgtcgctctggaaagaagctagaagataaccccaaatctctcaagtctggggatgctgcc
atcgttgaaatgatacctgggaagcccatgtgtgttgagagcttctctgagtacccacct
ttaggtcgttttgcggttcgtgacatgagacaaactgtggcagttggcgtcatcaaagct
gttgagagaaaggctactggtgctggcaaagtaaccaagtctgcccaaaaggctcagaaa
agcagatga
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integrated database retrieval system
