Rhincodon typus (whale shark): 109919109
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Entry
109919109 CDS
T06055
Symbol
pnpla6
Name
(RefSeq) patatin-like phospholipase domain-containing protein 6 isoform X1
KO
K14676
lysophospholipid hydrolase [EC:
3.1.1.5
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
109919109 (pnpla6)
Enzymes [BR:
rtp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.5 lysophospholipase
109919109 (pnpla6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NTE_Ploop
cNMP_binding
Patatin
CofJ
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
109919109
NCBI-ProteinID:
XP_048473831
LinkDB
All DBs
Position
38:18229483..18377569
Genome browser
AA seq
1541 aa
AA seq
DB search
MTVNAGLASVTHVPWINMCPESGMLHSSAAKSSMMGVILGAGVAVVLIATTILIVHRRLQ
ERRIQAQETPKYRFRKRDKVMFYGRKIMRKVSQSTYSFVGTSRPRAKRKAKMLIIAKRFL
HINKEVPTLQPKEPPPSVLEADLTEFDVASSHLPLEVLYMLKNVRVLGHFEKPLFLELCK
HMVFQQFQQGEYVFRLGQADNSIYVVQDGKLELSLMGTDGKECVVKEIFPGDSVHSLLSI
LDVITGHQRPYKTVSARAAEESTVLCLPVEAFQTIFEKYPESLVRVVQIIMVRLQRVTFV
ALHNYLGLTNELFIQENQPSRLIPQASCTTRTSPVRYRRFTSVPVAEDQKDTAGKLILDP
GIPLDPALKEPPDFSYVVITKVEAETDDAPSLGQKRLLKRRSILKGERPKMPKEREMCTE
SENQDETQFQEKSTLEDPTGEEIVKKKQDRNRVVKRVSIAPIEPISNTEIAQPRLVTSTS
EASVPLLHEQEKGTSLETSEETQLVPVGNEVLKGPILENNRGALLSRCISMPLDISGIQK
GVCSDFDMAYERGRISSSLQEDSPLSSMPLSRSAPQETRERKSVTVEEHPSCVYLYTEDD
TDEVYGAPQIKHVGTIFEEAKQELLKLLRIEDPSLLNNRVTLHYAKPGSVLARQGDQDVS
LHFVLSGYLHVYQRMIDKEDDVCLFVTHPGEMVGQLAVLTGEPLIFTVKANRDCVFLKIS
KSDFYEIMREQPNVVLSAAHNVAVRMSPFVRQMDFAIDWMAVEAGRALYRQADRSDCTYI
VLNGRLRSVIRKANGKKELVGEYGRGDLIGVVEALTHQPRATTMHAVRDSELAKLPEGTL
NNIKRRYPQVVTRLIHLLGQKILGNLQQVHGTFPGSGIGFSTASSADVTNPTSNLSTVAV
LPVCDEVPIAAFTMELTHALNAIGPTLLLTSDIIRQRLGASALDSIHEYRLSGWLAQQED
IHRIVLYQTDYSMTPWTQRCIRQADCILIVGLGDQEPSLGELEQMLENTAVRALKQLILL
HKEDGPSPSRTVEWLNMRSWCSGHFHIKCPRRIFSRRSLQKLREMYEKLFEKTADRHSDF
SRLARILTGNTIALVLGGGGARGCSHVGVMKAMEEIGIPVDIVGGTSIGSFIGALYAEER
SAVRTKQRAREWANAMNSVFKTVLDLTYPITSMLSGSAFNTSIADVFEDKQIEDLWIPYF
NVTTDITASAMRVHKDGSIWRYVRASASYVPYLPPLCDPKDGHLLVDGCYVNNVPGSLWR
YVRASMSLSGYLPPLCDPKDGHLLMDGGYINNLPADIARNMGAKTVIAIDVGSRDEAELS
NYGDSLSGWWLLWKRLNPWAEKVKVPDMAEIQSRLAYVSCVRQLELVKSSAYCEYIRPPI
DRFKTMDFGKFDEIYNVGYQYGKVVFSSWNRGDIIDKMLTDRKSVDYYEIKKKNAFMSSN
AAFTDLAEIVSRIEPPKSYNLADAEESDYLTEYEDEVMDAVRDEEQDDNEELEDQDDPET
NHSAAEWTQESAFEMDEQNNVRHRKAGSNTQQNPSTQSDCC
NT seq
4626 nt
NT seq
+upstream
nt +downstream
nt
atgacagtaaatgctggcctagccagtgtcactcatgtcccttggattaatatgtgtcca
gagtctggaatgcttcacagttcagctgcaaagtcatcgatgatgggagtaattctgggg
gctggagtggcagttgtgctgattgccaccaccatcctcattgtacacagacgattacaa
gagagaagaattcaagctcaggaaaccccaaaataccgattccgaaaacgtgacaaagta
atgttctatggacgcaagatcatgaggaaggtgtcacaatccacgtattcctttgttgga
acttcaagaccaagagcaaaaaggaaagcgaaaatgctgatcattgcaaaacggttcttg
cacattaataaggaagttccgaccctgcagccgaaggagccccctccctctgttcttgag
gctgacctgactgagtttgatgttgccagctctcacttgcccttggaagtgctgtacatg
ctgaagaacgtaagagttctgggccattttgagaagcctctgtttctggagctgtgtaaa
cacatggtcttccagcagttccagcagggggagtacgtcttccgactgggccaggcagac
aacagcatctatgtggtacaggatggcaagctggagctcagcctgatgggaactgatggg
aaggaatgtgttgtgaaggagattttccctggtgatagcgtgcacagtttacttagcatt
cttgatgttattacgggtcaccaacgaccatacaagactgtgtctgctcgagctgctgaa
gaatcaactgtgctttgtttaccagtggaggcatttcagacaatttttgagaagtatcct
gaaagcctggtcagagtagtacagattatcatggtgcggctacagagagtgacattcgtg
gctctgcataactacctaggcctgacgaatgaactcttcattcaggagaaccagccatca
cgcctgattccgcaagcgagctgcaccacacggacaagccctgtgcgataccgccgtttc
accagtgtgccagtagctgaagatcagaaggatactgctgggaagttgattcttgaccca
ggtattcctttggaccctgcattgaaggaaccaccagacttctcatatgtagtaataacc
aaagtcgaggctgagactgatgacgcacctagcttagggcaaaagagactactgaagcgg
cgttccatactgaagggagagcgccccaagatgcctaaggagagggagatgtgtacagaa
tcagagaaccaggacgaaacacagttccaggaaaagtctacattagaggacccaacagga
gaggagatagtcaagaagaagcaggataggaatcgggtggtgaaacgagtctcaatcgct
cccattgaacccatttcaaatactgaaatagctcaacctcgcctagtaacaagtaccagt
gaagcaagcgtacctcttctgcatgagcaagagaagggaacatctctagaaactagtgag
gaaacccaacttgttccagtaggaaatgaagtactaaagggaccaattttggagaataat
cggggagcattgctgagccgctgtatatccatgccattggatatttctggaatacagaaa
ggagtttgctcagactttgacatggcgtatgaaagagggaggatttcatcgtccttacaa
gaggatagcccactgagctccatgccactaagcagatctgcaccacaagagaccagggag
cgcaagtctgtgacagtcgaggaacatccgtcatgtgtgtatctttatactgaggacgac
acagatgaagtctatggagcgcctcagatcaagcatgtgggaactattttcgaggaggcg
aagcaggagctcctgaaactactgcgtattgaggatccatctcttcttaacaaccgcgtc
accttgcactatgccaaacctggaagtgtactggcccgtcagggagaccaggatgtcagt
ttacattttgtgctgtcgggctacctgcatgtttaccagcgaatgattgacaaggaggac
gatgtgtgcctatttgtgactcaccctggagaaatggtgggccagcttgctgtcctgact
ggtgagccactgatcttcactgtcaaagcaaaccgtgactgcgttttccttaagatctcc
aaatcggatttctatgaaataatgcgcgaacagcctaacgtggtgctcagtgctgcacat
aatgtggctgtcagaatgtctccatttgtacggcaaatggactttgcaattgactggatg
gcagtagaagcaggccgtgccctctataggcaggctgaccgatcagactgtacctatatc
gtcctgaatggacgactgaggtctgtgatccgcaaggctaacggcaagaaagaacttgta
ggagaatatggacgtggagatctgattggagtggttgaagccctaactcaccagccccgc
gccactacaatgcatgcagttcgtgactctgaactggccaagttacccgagggaacactg
aataatatcaagagaaggtatcctcaggtagtcactcggttgattcaccttctgggtcag
aagatcctgggtaacctgcagcaggtgcacgggacatttccaggctctggaatcggattc
tcgacagctagcagtgccgatgtaacaaacccaaccagtaacctatccactgtggctgtg
cttcccgtctgtgacgaagtaccaattgctgccttcaccatggagctgactcatgcactc
aatgctattgggcccacactgctgttgaccagtgatattattaggcagcgtctgggtgca
tcagcactggacagcatccatgaataccgtctgtcaggctggctggcccagcaagaggat
atccaccgcattgtgttgtaccaaactgactacagcatgacaccttggacccaacgctgc
attcggcaggcagactgcatccttattgtcggacttggagaccaagagcccagtttggga
gagctggaacagatgttagagaacacagccgtacgggcactgaaacagctcatcctttta
cacaaggaagatggtcccagtccttcccggaccgtggagtggttgaacatgaggagctgg
tgttccgggcacttccacatcaaatgtcctcgcaggatcttctctcgtcggagcctccaa
aaattgagggagatgtatgaaaaactatttgaaaaaacagcagatcgacacagcgacttt
tctcgactggcccgaatcctcacaggaaacacaatcgcactggtcttaggagggggagga
gccaggggatgctcacatgtcggtgtaatgaaggccatggaggagattggaatcccggtc
gatattgttggaggaacctctattgggtcgtttattggggcattatatgctgaggagcgg
agtgcagtgaggacgaagcagagagcaagagagtgggcaaacgcaatgaactctgtcttc
aaaactgtgttagacctgacctaccccatcacctctatgctgtcgggttctgcctttaac
acaagcattgctgatgtgtttgaagacaaacaaattgaggacctgtggatcccatatttc
aatgtaacaactgatatcaccgcatctgcgatgcgagtgcacaaagatggcagtatctgg
cgttacgtcagagcgagtgcatcttacgtcccttatttgcctcctctctgtgaccccaag
gacgggcatttgcttgtggatggctgctatgtaaacaatgtcccaggctcgctgtggcgg
tacgtgcgagctagcatgtccctctcgggctacctgccaccactctgtgatccaaaggac
ggacatttgctcatggatggaggatacatcaacaacctgccagctgacatcgcaagaaat
atgggcgccaaaacagtgattgccattgatgtgggcagcagggatgaagctgagctgagt
aactatggagacagtctttcgggatggtggctgctttggaaacgcctaaatccatgggca
gaaaaagttaaagtgccagatatggcagaaattcagtctcgactggcttatgtctcctgt
gttcgacaactggagctggtaaaaagcagtgcgtactgtgaatacattcggccacctatt
gacaggttcaaaaccatggactttggcaagtttgatgaaatttataatgtcggataccag
tacggaaaggtggtcttcagtagctggaacaggggcgacattatcgacaagatgctaacg
gacagaaaatcagtcgattattatgaaatcaagaagaagaatgcctttatgtcctcgaat
gctgcattcactgacctcgctgaaattgtgtctcgaattgaacccccaaagagctacaat
ttagcagacgcagaagaatctgattatcttactgaatatgaggatgaagtgatggatgca
gtgagggatgaggaacaagatgacaatgaggagcttgaagaccaggacgatccagaaacc
aaccactcagctgctgaatggactcaggaatctgcttttgaaatggatgaacagaacaat
gtaaggcatcgtaaagctggcagcaacacccagcaaaaccccagcacccaatcagactgt
tgctaa
DBGET
integrated database retrieval system
