KEGG   Rhincodon typus (whale shark): 109919162
Entry
109919162         CDS       T06055                                 
Name
(RefSeq) cullin-associated NEDD8-dissociated protein 1-like isoform X1
  KO
K24172  cullin-associated NEDD8-dissociated protein 2
Organism
rtp  Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rtp04121]
    109919162
Ubiquitin system [BR:rtp04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    109919162
SSDB
Motif
Pfam: TIP120 TPR_CAND1 HEAT_EF3_N HEAT_GCN1 HEAT_EZ HEAT HEAT_2 TOR1L1_N HEAT_GCN1_C_2 HEAT_MROH2B_C Adaptin_N TPR_IMB1 Cnd1 HEAT_GCN1_C HEAT_ECM29 Ltn1_1st TPR_DNAAF5 MMS19_C ARM_TBCD_2nd TPR_IPO5 XMAP215_CLASP_TOG mTOR_dom CEP104-like_TOG HEAT_DAAF5 Uso1_p115_head Gcn1_N
Other DBs
NCBI-GeneID: 109919162
NCBI-ProteinID: XP_048462282
LinkDB
Position
16:58688348..58729910
AA seq 1236 aa
MANVSYHISNLLEKMTSSDKDFRFMATNDLMVELQKDSIKLDDDSEKKVVKMLLRLLEDK
NGEVQNLAVKCLGPLVSKVKEYQVETIVDTLCTNMLSDKEQLRDISSIGLKTVIAELPPA
SSGLALSANVCKKITGRLTSAIAKQEDVSVQLEALDILSDMLSRLGGTLITFHSSILTCL
LPQLSSPRLAVRKRAIIALGHLVMSCSTCLFSELMDHLLVELSKNESTSMTRTYIQCAGA
ISRQAGHRVGEHLEKIIPLVVKYCNVDDDELREYCFQAFESFVRRCPKEMSLHIPAMIGL
CLKYITYDPNYNYDQDEDDEDAMETDKTDEEEDQDSEEEYTDDDDMSWKVRRASTKCLDA
IVSTRHEMLQEFYKTISPALISRFKEREENVKADIFHAYVSLLKQTKPVQSWLQTTDALG
QGDMPLMMLQHQVPSIVKALHKQLKEKSMKTRQGCFNLLTELASVLPGGLSEHIPALVPG
IIYSLTDKSSTSNMKIDALTFFHVILCNHPPEVFHPHIKTLLPPTIACISDPFYKITSEA
LLVTQQLVEVIRPLDKPCSFDAKPYVKDLFSSTLKRLKASDIDQEVKERAIACMGQIICN
LGDNLGADLNPTLQIFLERLKNEITRLTTVKTLTLIASSPLKIDLRPILGEGVPILASFL
RKNQRALKLSTLAALDILIKNYGDSLKPVMIESVLKELPSLIGESDMHVSQMAITFLTSL
AKVYPSSVAKIGGSILMELFNLVRSPLLQGGALNAILDFFQALVVSKAPNMGYMELLKQL
TGTIYSSAQSGGGVVLHKQAYYSVAKCVAALTSACPKDANTVVNQFVQDVKSPKSPDSVR
LLALLSLGEIGRTMNLSAQKELKLVILEAFSSPSEEVKSAASYALGNISVGNLSEYLPFI
LKEISSQPKRQYLLLHSLKEVISSSPADSLKSHVQDIWALLFKNCECAEEGTRNVVAECL
GKLTLIDPGRLLPKLKKQLTSGSAYSRSTVVTAVKFTISDHPQGIDPLLKGCIGDFLRTL
QDPDLNVRRVALVMFNCAAHNKPSLIRDLLETVLPQLYNETKVRKELIREVEMGPFKHTV
DDGLDIRKAAFECMYTLLDSCLDRLDIFEFLNHVEDGLKDHYDIKMLTFIMLARLSTVSP
SAVLQRLDRLVEPLRATCTTKVKANSVKQEFEKQDELKRSAMRAVAALLTIPEAEKSALM
AEFQSQIRSNPEMAAIFESIQKDNVSASSTETMDLS
NT seq 3711 nt   +upstreamnt  +downstreamnt
atggccaatgtgtcctatcacatctccaacctgctggagaaaatgacctccagcgacaag
gacttcagatttatggccaccaatgatctgatggtggagctgcagaaagactccattaag
ttggatgatgacagtgagaagaaggtggtgaaaatgttgctcaggctgctagaagataag
aatggagaggtgcagaacctggctgtgaagtgcttgggcccattggtcagcaaggtgaaa
gagtaccaagtggagacaattgtggatacgttatgtacgaacatgctgtctgataaagag
cagctacgggatatatccagcattggcctgaagactgtcattgcagagctgcctcctgct
tctagtggcttggccctgtctgctaacgtgtgcaagaagattactggacgtctgacaagt
gctatcgctaagcaagaggatgtttctgtccagctggaggccctggacatattgtctgat
atgctgagcaggttgggtgggactctgatcacatttcactcctcgatcctgacttgcctg
ctgcctcagctgtccagtccaaggctggctgttcgcaagagagccattattgctctgggg
catctggtcatgagctgcagcacgtgtctcttctctgaactaatggatcacctactagtc
gaactgtcaaagaatgaatctacgtctatgaccagaacatacatccaatgcgccggtgcc
atcagccgacaggcagggcacagagttggagaacatttagagaagattattccacttgtt
gtaaaatactgcaatgtggatgatgatgagctgcgggagtactgcttccaggcgttcgaa
tcctttgtgagaaggtgtccaaaggaaatgtcccttcacatacctgctatgattggtctg
tgcctcaaatatatcacatatgatccaaattacaactatgaccaagatgaggatgatgaa
gacgccatggaaacagacaaaactgatgaagaggaggatcaagacagtgaagaggagtac
accgatgatgacgacatgagctggaaagttcgccgagcttctactaagtgtttggatgcc
attgtgagcaccaggcatgagatgctgcaggaattttacaagacaatctcgccagccctc
atcagtcgattcaaggagcgagaggagaatgtgaaggctgacattttccacgcgtatgtc
tctcttctgaagcagaccaaaccagtccagagttggttgcagactacagatgccctggga
caaggggacatgcccctaatgatgcttcagcatcaagtacctagtatagtgaaagctctg
cataagcagcttaaggagaagagtatgaagactcgacaaggctgtttcaatctcctcact
gaattggccagtgtcctacctggaggcttgtcagaacacataccagccttagtaccaggc
attatttactctctcactgataaatcgagtacctcaaacatgaagattgatgcactgacc
tttttccatgtcatcctttgcaatcatccaccagaagtgttccaccctcacatcaagaca
ttgttgccaccgacaatagcctgtattagtgatccattctacaaaatcacttctgaggcc
ttgcttgtgactcagcagcttgtagaggtaatccgtccactggacaagccttgttcattt
gatgccaagccttatgtgaaggatctgtttagtagcactttaaagagattgaaggcatct
gacattgaccaagaggtgaaggagagagcgatagcctgcatgggacagatcatctgtaat
cttggagacaacctaggtgctgacctgaatcccacattgcagattttccttgaacgactg
aaaaatgagatcaccagactgaccacagtcaaaaccttaactctgattgcaagttctcct
ttaaaaattgacctacgtccgattcttggtgagggtgttcccatcctggcttcctttctt
aggaagaaccagcgtgcactgaaactcagtaccctagcggcactggacatcctgattaag
aattacggtgacagtcttaagccagtgatgattgagtcagttttaaaggagcttccatcc
ttgattggggagagtgacatgcatgtctcccagatggccattaccttcctaacatcattg
gccaaagtctatccatcgtctgtggccaagattggtgggtccatattgatggaattgttc
aacctagttcgttcaccgctgctccaaggaggggctctgaatgccattttagacttcttc
caggctttggtggtatccaaggctcccaacatgggctacatggagcttctgaagcagctg
acaggaactatctattcttcagcccagtcgggtggtggtgtagttttgcacaaacaggcc
tattattctgtggctaaatgtgtagccgcacttacctcggcatgtccaaaggatgccaat
accgtggtgaaccaatttgtccaagatgtgaagagtcccaaatcgcctgactcagtccgc
ttgctggctctactttctttgggtgagatcggccgcaccatgaatctgagcgcacagaaa
gaactcaagctggtgatccttgaagcgttttcgtcacctagcgaggaagtcaagtcagcg
gcctcctatgcgttaggaaacatcagtgtgggaaacctcagtgaatatcttcccttcatt
ctgaaggagatcagcagccaacccaagcgccagtacttgttgttgcactcattgaaagaa
gtcatcagctcttcaccggcagacagcttgaaatctcacgtccaggacatttgggccttg
ttgttcaaaaactgcgagtgcgctgaagaggggactcggaacgtggtggcggaatgtttg
ggaaaattgaccctcatcgaccccggccgcctgctgcccaagctgaaaaagcagctcaca
tcaggttcagcctactctcgaagtacagtggtgactgctgttaagtttacaatttcagac
catccacagggtattgaccctctgctgaaaggctgcataggtgactttttgcggaccctg
caggaccctgatctcaacgtccgacgcgttgccttggtgatgttcaattgtgcagctcac
aataagccttccctgattagagacttgctagagacagtgcttccacagctatacaacgaa
accaaggtcaggaaggagctcatcagggaggtagaaatgggacctttcaaacacacggta
gatgatgggcttgacattcggaaagctgcttttgaatgcatgtataccttgctggatagt
tgccttgataggctggacatttttgagtttctcaaccatgtggaagatggcttaaaggat
cactatgatatcaagatgctgacgttcatcatgttagcacggctatcaacagttagcccc
agtgcagtgcttcagaggttagacaggctggtggagcccctgcgtgcaacctgcactact
aaggtaaaggctaactcagtgaaacaggaatttgagaagcaagatgagctgaagcgctca
gcgatgagggcagtagcagctttactcacaatcccggaggctgagaagagcgcactgatg
gcagagttccagtcacagattcggtctaaccctgagatggcggctatttttgaaagcatc
cagaaagacaacgtatccgcgagtagtacagaaacaatggacctcagctaa

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