Rhincodon typus (whale shark): 109919290
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Entry
109919290 CDS
T06055
Symbol
irx4a
Name
(RefSeq) LOW QUALITY PROTEIN: iroquois-class homeodomain protein irx-4
KO
K24889
iroquois-class homeodomain protein IRX
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109919290 (irx4a)
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
109919290 (irx4a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
109919290
NCBI-ProteinID:
XP_020374867
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Position
2:105844648..105850769
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AA seq
574 aa
AA seq
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MSEPMKTRASLHTMGLYRNVLYSTAKARHDLNWKRPFSRLSAEPVCACQSIGTVRSSRLQ
SRGDQAALSLXLSFSPFPECWEPWTMSYPQFGYPYTSAPQFLMTTNPLTTCCESSGRTLV
DSGAAASAQTPVYCPMYESRLLATARHELNSAAALGMYGSPYATNQGYGNYVTYGTEPSA
FYSLSPFDTKDAAGSAHAGITQAAAYYPYDPSLGQYQYDRYGAVDSGARRKNATRETTST
LKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWSPRNKCTD
DKKTYGDEEDESPNDKSPEDKHNDDTTCKEDKELQLSDLDDFDGIETESDECELKGPFQQ
MDSTQIRVSDCPTDQCKKVSLKIALPTPGDRHSEKVKDCLKRVMANSEQDLMAGRQRGCE
SKLCFQQQQHSQQMLDNKPRIWSLAQTATSLSQTEYPSCMLKRHQQALSSSPPLASMPTS
VLDRQDSPVTTLRNWVDGVFHDPLLRHSTLNQALTNTTVSWATSKGVILDTEAMGRSLGT
PTNMIKGQITGLPQHETTKDIAAFPKTGSKMFCS
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacccatgaagactcgagcaagtctacacaccatgggtttgtacagaaatgta
ctctacagtacagccaaagcaagacacgatttaaactggaagagacctttttcgcgttta
tctgctgagcctgtgtgcgcttgccaatcaattggtacagtgagatcgagccggctgcaa
tcgcgcggagaccaggcagcgctctctctcnncctctctttctctccctttcctgaatgt
tgggagccttggacaatgtcgtacccacagttcggatatccctatacatcagcacctcag
tttctgatgactaccaaccccctgactacgtgctgtgagtcaagcggcaggacgttggtt
gattcaggggctgccgcctctgctcaaactcctgtctattgtcccatgtacgagagcagg
ctgctggccacagccaggcatgagctcaactcagctgctgccctcggaatgtatgggagc
ccgtatgccactaaccagggatatggcaactatgtcacctatgggacagaaccctctgct
ttctattcactgagtcctttcgacaccaaggatgcagcaggatctgcgcatgcgggaatc
acgcaggcagctgcctattatccatatgatccgagcttgggacagtatcagtatgacaga
tatggtgcagtggattcaggagccaggcgtaaaaatgcaacaagggaaacgaccagtacg
ttgaaagcttggctgcaagagcacaggaagaacccctacccgaccaagggagaaaagatt
atgctggccatcatcacgaagatgactctgacccaggtctccacctggttcgccaatgcc
aggaggagactcaaaaaagagaataaaatgacctggtcgcccaggaataaatgtacggat
gacaagaaaacttatggagacgaagaagatgaaagtccaaatgataaaagcccggaagat
aaacataatgatgataccacatgcaaagaagacaaagaactgcagctgagtgaccttgat
gactttgatgggattgagactgaaagtgatgagtgtgaactgaaaggcccatttcagcag
atggacagcactcagatcagggtctccgattgcccgactgaccagtgtaagaaggtttct
ttaaagatagccctgccaacaccgggagatcgccattcagaaaaggtcaaggactgtctc
aaacgagtaatggcaaattccgagcaagacttaatggcaggaagacagagagggtgtgag
tcgaagctttgcttccagcaacaacagcacagtcagcagatgcttgacaacaagcctcgt
atctggtccctagctcaaaccgcaacttctttgagccaaactgaatatccatcttgtatg
ttgaaaaggcaccaacaggctctctcctcctcgcctccgttggcctctatgcccaccagc
gtgttggatagacaagattccccagtaaccaccctcaggaattgggtggatggggtattc
cacgacccgctgctcagacatagcactttgaaccaggcactaaccaacaccaccgtttcc
tgggctacctccaaaggtgttatcttggatacagaggcgatggggcgttctttgggaact
cctacaaacatgattaaaggacagatcacaggcttaccccaacatgaaactactaaggac
atcgcagcatttcccaaaacaggaagcaaaatgttttgttcataa
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