Rhincodon typus (whale shark): 109919337
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Entry
109919337 CDS
T06055
Name
(RefSeq) transcriptional repressor protein YY1-like
KO
K09201
transcription factor YY
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03082
ATP-dependent chromatin remodeling
rtp03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109919337
03083 Polycomb repressive complex
109919337
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109919337
03036 Chromosome and associated proteins [BR:
rtp03036
]
109919337
03029 Mitochondrial biogenesis [BR:
rtp03029
]
109919337
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
109919337
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
109919337
Mitochondrial biogenesis [BR:
rtp03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
109919337
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
Raffinose_syn
zf-C2H2_ZN142
IBR
INO80_Ies4
C2H2_ASCIZ
Motif
Other DBs
NCBI-GeneID:
109919337
NCBI-ProteinID:
XP_048455922
LinkDB
All DBs
Position
8:complement(34249963..34279711)
Genome browser
AA seq
323 aa
AA seq
DB search
MASGDTLYIAADGSEMPAEIVELHEIEVETIPVETIETTVVEGDVHQPMIALQPLSDDPS
QVHQEVILVQTREEVVGDDAELRAEDGYEDQILIPVPSAGAEEEFIEQTLVTAVSGKSRI
KKGAGKKATKKSYLNDGGLDRTGRKWEQKQVQIKTLEGEFSVTMWASDDKKTDIDHETVV
EEQIIGENSPPDYSEYMTGKKLPPGGIPGIDLSDPKQLAEFARMKPRKQKEDDAPRTIAC
PHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQVKPV
KYCPLSSNANCQYRILCIDGYGV
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgggcgacactttatacatcgcggcagacggctcggagatgccggccgagatc
gtggagcttcacgagatcgaagtggagacgatcccggtggaaacgatcgagaccacggtg
gtagaaggcgacgtgcaccagcccatgatcgccctgcagcccctcagcgacgacccgagc
caggtccaccaggaggtgatcctggtgcagacgcgggaagaggtggtcggggacgacgcc
gagctgagggccgaggacggttacgaggaccagatcctgatcccggtgccgtcggcgggc
gccgaggaggagttcatcgaacagactctggtgacggccgtctccggcaagagccgcatc
aagaaaggggccggcaagaaggccaccaagaagagctacctgaacgatggggggctggac
aggaccggcaggaaatgggagcagaagcaagtgcagatcaagaccctggagggggaattt
tcggtgacaatgtgggcttcggatgataaaaaaactgatattgaccatgaaactgtggtg
gaggaacagatcattggagaaaattctccacccgattactctgaatacatgactgggaag
aaacttccccctggtgggataccaggcattgatctctctgacccaaagcagctggcagaa
tttgcaaggatgaagccaagaaagcagaaagaagatgatgcacctagaaccatagcatgt
cctcacaaaggttgcacgaaaatgttcagagataactctgccatgagaaagcatttgcat
acccacggcccccgagtacatgtgtgtgccgagtgtggaaaagcttttgtggagagttca
aaactgaagcgacatcaacttgttcacactggtgaaaaaccgttccaggtaaagcctgtt
aagtattgtccgctttcctctaatgctaattgtcagtatagaattttatgcattgatgga
tatggtgtttag
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integrated database retrieval system
