Rhincodon typus (whale shark): 109919372
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Entry
109919372 CDS
T06055
Symbol
rbl1
Name
(RefSeq) retinoblastoma-like protein 1 isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04110
Cell cycle
rtp04218
Cellular senescence
rtp04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
109919372 (rbl1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
109919372 (rbl1)
04218 Cellular senescence
109919372 (rbl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109919372 (rbl1)
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
109919372 (rbl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
Rb_C
Motif
Other DBs
NCBI-GeneID:
109919372
NCBI-ProteinID:
XP_048464118
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All DBs
Position
19:complement(1522508..1606842)
Genome browser
AA seq
1098 aa
AA seq
DB search
MPSGESRDGGRRSLRDSFDKLCQDLNMDLESGAEAWENLQRIRLNYTLEGETLHWLACAL
YVACRKSITPTVGKGTMEGNGVSLTRILRSSKLSLIQFFSKMKKWADMANLSQEFRERVE
QLERNFEVSTVIFKKFEPIFLDMFQNRHEDQPRLQRSRKQRRLPCSTSDAFSFCWTLFVY
TKGNFRMIGDDLVNSYHLLLCCLDLVFGNALLCPNRRELLNPNFEGLPPEFNSQDYKPPV
QPPCIIDKLCDLHDGLTVEAKGIKEHYWKPYIKKLFERKILKGNGELLVGLLDVNNFTDN
NKAINKEYEEYVLTVGDFDERIFLGEDADEEIGTPSKSAADASVGKLSARIQVECNLQQH
FEKTKSLAPSTPLTGRRYLKEKELVVTPVSSATQSVGRLQTMVTGLKNTPSEHLLQVFNS
CSRNPVEAITARMKKMGETFCYYYTQPMESQAGSHIDFAIQRLRLAEILYWKVMETVMLQ
ENRRNPGKDMIVLLEQDIFHRSLMACCLEIVLSSYNSQRTFPWIIDILNLSPFYFYKVIE
VLIRAEDGLSRDMVKHLNNIEEQILETRAWSHDSALWKALLGADSNVPTCEEVTFPSNFE
TGNGGPTHLPMMPMSPIIHPRVKEVRTDIAGTFNKRDVPPPASPLSVHDRFTSPSAGSAK
RRLFGDDNVLDTHVNIAQNNVSQSPELRIIQTQSITNENITISPGQTVVTMATATVTATN
GQTLTIPVQGIANETGGITFIPVHMNVPQQSQVAEETVQVPLSAQTLINSSPKHLGIGTT
QEPQVAINKPKKTGSLALFFRKVYHLASVRLRDLCLKLDVSAELRRKIWTCFEYSLVHCV
DLMADRHLDQLLLCAVYIMAKVTKEDRCFTDVMKCYRSQPQANSNVYRSVLLQGGKWLRM
TGIDEHKGEDVNMEEQVPNSDHPSSKNSIVRCPGKTSSPPLSPARVSRCPVALQEERGDL
IKFYNTIYVNRIKEFALKYSNVKQECGVEAPPLSPFPNVKPHPVSPRRISQRHAVYISPH
KNGTSLTPRTAMMYRFNRSPSKNLRDINCMIKQGERLSRKRAFTMEGDSESPAKCLCQEN
DDILLKRLQDVVSERANR
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcggagagagccgggacggcggcaggcggtcactccgcgacagcttcgacaaa
ctgtgtcaggacctgaacatggacctggagagcggggccgaggcttgggagaacctgcag
cggatccgcctcaactacaccctggagggagaaactctgcactggcttgcttgtgcctta
tatgtagcctgtcgcaaaagcatcacgccaactgttggcaaggggacaatggaaggaaac
ggtgtgtcactgacaagaatcctccgctcatcaaagttaagcctgattcaatttttcagc
aagatgaaaaaatgggcagacatggccaatttatcccaagaattcagggaacgtgtggag
cagttggaaaggaattttgaagtctcaactgtaatcttcaaaaaatttgaacctatattt
ttggacatgtttcaaaatcgtcatgaagatcagcctcgccttcagagaagcagaaaacag
cggcgccttccatgcagcacgtctgatgcttttagtttttgctggaccttgtttgtatac
actaaaggcaatttccgtatgattggagatgaccttgtaaattcttaccatctcttgctc
tgttgcctggatctcgtgtttggaaatgctttactgtgtcctaatagaagagaactgctt
aacccaaattttgaaggtttgccaccagagtttaacagtcaggactataagcccccagtg
caacctccatgcatcattgacaaactttgtgacttgcatgatggactcactgtagaagca
aaaggcatcaaggagcactactggaaaccttacattaaaaagctgtttgagagaaagatt
ttgaaaggaaacggtgagctcctcgtaggacttctggatgtgaacaattttacagacaac
aacaaagcaataaacaaggaatatgaagagtatgttctgaccgtaggggattttgatgag
cggatatttctgggagaagatgccgatgaagaaatagggactccaagcaaatctgcagcg
gatgcttcagttgggaaactatcggcaagaatccaagtcgagtgtaaccttcaacagcac
ttcgaaaaaacaaagtctttagcaccttcaacacccttgacaggaagacggtacttgaag
gagaaggaactggttgtaacaccagtgtcatcggccacacagagcgtaggtcgtttacag
accatggtaacgggactcaagaacactccaagtgagcatctgctgcaggttttcaactcc
tgttctcggaacccagttgaagctataacagcccgcatgaaaaagatgggggagactttc
tgctattactacacacaaccaatggaaagccaggctggttctcatatagattttgccatc
cagcgactaagacttgctgaaattttgtactggaaagtcatggagacagtgatgctgcag
gaaaatcgccgaaaccctgggaaagacatgattgttttactggagcaagatattttccat
cgctctctgatggcttgttgcctggagatagttctctcctcttacaattcacagcgtaca
ttcccatggattatcgacatcctgaatcttagtcctttttacttctacaaggtgatagaa
gtgctgattcgggcagaggacggtctttcccgtgacatggtgaagcatctcaacaatatt
gaagagcaaattttagagactcgagcttggagccatgactcagctctttggaaagctttg
cttggagcagacagtaacgttccaacatgtgaagaggtgacttttccatccaattttgaa
actggtaatggaggtcccacccacctgccaatgatgccaatgtctcctataatacaccct
cgagtaaaggaagtccggacagacattgctgggacctttaacaaacgagatgttcctcct
ccggcatcaccactgtctgttcacgatcgattcacctcgccctctgcaggaagtgctaaa
aggaggctgtttggtgatgacaatgtattggacacccatgtgaatattgctcagaataat
gttagccagtcacctgagctaaggatcatccagacacaaagtataaccaatgaaaacatt
accatctctcctgggcaaactgttgtaaccatggcaacagctactgtaacagctaccaat
ggtcaaactctgactatacctgtgcaaggtattgcaaatgaaactggtgggatcactttc
atcccagtccacatgaatgtacctcagcaatcacaggttgcagaagaaactgttcaagtc
ccactctctgcccagactttaatcaactcttctcccaaacatttgggaattggaaccaca
caggagcctcaggtagcaattaataaaccaaagaagactggctcactggcattattcttt
cgaaaggtatatcatctggccagtgtccgtctgcgtgacttgtgtctaaaactggatgtg
tctgcagagcttcgtaggaagatttggacgtgctttgagtattctttagtgcattgcgtt
gatctgatggcagacaggcaccttgatcagctcctcctctgtgctgtctacataatggca
aaggttactaaggaggatagatgtttcacagatgtaatgaaatgttacaggagtcaaccc
caagccaacagcaatgtgtacagaagcgttctccttcaaggaggcaagtggttaaggatg
actggtattgatgagcataaaggggaagatgtaaacatggaagagcaggtgcccaatagt
gatcatccaagctcaaaaaatagcattgtacgttgtcctggcaaaacaagcagtcctcca
ttgtctcccgccagagtgtccaggtgtcctgtagctcttcaggaagagaggggtgacctt
attaagttctataatactatctatgtgaacaggattaaagagtttgcactgaaatactcc
aatgtaaaacaggagtgtggggtggaagcaccaccactatctccttttccgaatgttaaa
ccccaccctgtatcaccacgacggatatcacagagacatgcagtctacatctcacctcac
aagaatggcacctccctaacaccacgtacagctatgatgtacaggtttaaccggagccca
tcaaagaatctcagagacatcaattgcatgatcaaacaaggggagcggttgagcaggaaa
cgagcattcaccatggaaggtgacagcgagtctccagcaaaatgtctctgccaagaaaat
gacgacattttgttaaaacgattacaggatgtcgtcagcgagcgagctaaccgttga
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integrated database retrieval system
