Rhincodon typus (whale shark): 109919373
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Entry
109919373 CDS
T06055
Symbol
scfd1
Name
(RefSeq) sec1 family domain-containing protein 1
KO
K19998
sec1 family domain-containing protein 1
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109919373 (scfd1)
Membrane trafficking [BR:
rtp04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
109919373 (scfd1)
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
109919373 (scfd1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
109919373
NCBI-ProteinID:
XP_048456389
LinkDB
All DBs
Position
8:complement(57004391..57146048)
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AA seq
450 aa
AA seq
DB search
MFVLCNQNKELISYHAINRPDITDNEMENIMDTLVDSLFCFFVTMGAVPIIRCPRGNAAD
MVAVKLDKKLRENLRDARNSLFTGDGLGGGQFSFQRPLLILVDRNIDLATPLHHTWTYQA
LVHDVLDFHLNRVNLEETPGQENSPAGARPKKKNKKTYDLTAADNFWQRHKGSPFPEVAE
SVQQELDSYRTQEDEVKHLKSIMGLEGEDDGAISMLSDNTAKLTSAVSSLPELLQKKRLI
DLHTNVATAVLEHIKARKLDVYFEYEEKLMSKSTLDKSLLDIISDPDGGTPEDKMRLFIV
YYISSPQPPSEVDLEQYKKALSDIGCNLAPLNYIKRWKAFTKMASAPTNFGGSGPKSISL
LSRVMNTGSQFVMEGVKNLVLKQQNLPVTRILDNLIEMKSHPETDDYRYFDPKMLRGSES
SVPRNKNPFQERSSGEQARRNYCVRHCKKA
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtgttgtgcaaccagaacaaggaacttatttcatatcatgcaatcaatagacct
gatatcactgataatgaaatggaaaacattatggacaccctggtggatagcctcttctgc
ttctttgttacaatgggtgctgttccaattatacgatgtcctcgtggaaatgcagctgac
atggtagcagtgaaattggacaagaagctacgagaaaacctgcgagatgccagaaacagt
ctcttcacgggagatggccttggtggaggacaattcagtttccaaagaccgttattgata
cttgtagacagaaatatagatttggcaactccattacatcatacgtggacatatcaagct
ttggttcatgatgttctggatttccatttgaatagggtaaacctggaagaaacccctgga
caagaaaattctcctgcaggggctagaccaaagaaaaaaaataaaaaaacctacgatttg
acagctgccgataatttttggcaaaggcacaaaggcagtccttttccggaagtagctgaa
tctgtgcaacaagaactggattcctacaggacacaagaagatgaagtcaagcatttaaag
agtatcatggggctggagggagaggatgatggtgctattagcatgctttctgataatacc
gccaaactcacatcagcagtcagctctctccccgaactgctacagaaaaaaagactcatt
gatcttcatacaaatgtggcaacagctgttttggaacacattaaggctcggaagttggat
gtttatttcgaatatgaagaaaaattgatgagcaagtccacattagacaagtccttactg
gatataatctctgatcctgacggaggtacccctgaagataaaatgaggctgtttatcgtt
tactacatcagttcaccgcagccaccttcggaggttgacctagagcaatacaaaaaagca
ctgtctgatatcgggtgcaatctggctcctttgaattacatcaaacgatggaaagcattt
accaaaatggcatcagctcctactaactttggaggcagtggaccgaaatcaataagcctg
ctttcacgtgtaatgaacactggatcacagtttgtaatggaaggcgtgaagaatttagta
ttaaagcaacaaaatctaccagtgactcggattttggacaacctcatagagatgaaatca
catcctgaaacagacgactacagatattttgatccaaaaatgcttcgtggcagtgagagc
tctgttccaagaaacaaaaatccattccaagagaggtcatcaggcgaacaagctcgtagg
aattactgtgtcagacactgtaagaaagcttaa
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