Rhincodon typus (whale shark): 109919419
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Entry
109919419 CDS
T06055
Name
(RefSeq) cytoplasmic polyadenylation element-binding protein 1 isoform X4
KO
K02602
cytoplasmic polyadenylation element-binding protein
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04114
Oocyte meiosis
rtp04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
109919419
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
109919419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtp03019
]
109919419
Messenger RNA biogenesis [BR:
rtp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
109919419
Factors involved in mRNA localization
Trans-acting binding proteins
109919419
mRNA cycle factors
P-body specific factors
109919419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CEBP1_N
RRM_7
CEBP_ZZ
RRM_1
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
109919419
NCBI-ProteinID:
XP_020375008
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All DBs
Position
36:4915098..5006232
Genome browser
AA seq
487 aa
AA seq
DB search
MLLPTSAQDSSRGLPDTMDLCLGLQSLNLTGWDRPWSTQDSDTAVSKASSSVLGLLANPL
GAQLTRSAVGFPSLDPIGSNYADQIASSLPKRMDSRSMLDSRSSSPSDSDTSGISSGSDP
LSELMSSLRISPPISFLPMGGVGRDPLKRIGMSPRLDQEQASVTNPVSPNPFKRWSANSG
WANWDLLESPEDPFSIEKEARLHRQAAAMSEATFTWRGQLPPRNYKNPIYSCKVFLGGVP
WDITEVGLINTFRVFGSLSVEWPGKDGKHPRCPPKGNMPKGYVYLVFESEKSVRALLQSC
THDLMSTDGASEYYFKMSSRRMRCKEVQVIPWVLSDSNFVRSPSQRLDPSKTVFVGALHG
MLNAEALAAIMNDLFGGVVYAGIDTDKHKYPIGSGRVTFNNQRSYLNAVGAAFVEIKTPK
FTKKVQIDPYLEDSMCQACSAQPGPFFCRDPVCFKYFCRSCWQWQHSLEVLRHHRPLMRN
QKNRDSS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgctgcttcccacgtctgcacaggattcatcacgaggcctcccagatactatggacctc
tgcttaggcctacagtctctaaatctgacagggtgggaccgaccgtggagcacccaggac
tctgatactgcagtatcaaaggctagttcatcagttttaggcttgctcgctaaccctttg
ggtgctcagctgactagatcagcagtcgggtttccatcactggatcccataggatcaaat
tatgctgaccaaattgcatcatccttgccaaagcgtatggacagccgttcaatgttggac
tctcgatcaagcagcccatctgactctgatacaagtggcatcagctctggctctgatccc
ctttcagaattaatgtcaagccttcgcatttctcctccaatttcctttttgcccatgggt
ggagtaggcagggatccgctgaaacgtattggcatgagccctcgactggatcaagaacag
gcttctgtgaccaatcctgtgagccctaaccctttcaaaagatggtcggcaaattctggg
tgggcaaattgggatcttttagagagtccagaagatcctttttcgattgaaaaggaggcc
cgattgcatagacaagctgcagcaatgagtgaagccacatttacatggaggggccagcta
ccaccccggaattacaagaacccaatatattcctgcaaagtgttcttgggtggtgtaccc
tgggatattactgaagttggactgataaatactttcagggtatttggctcactgagtgtg
gaatggccgggtaaggatggcaagcaccctcgatgcccacccaaaggtaatatgccaaaa
ggttatgtctacttggtttttgaatctgagaagtctgtgcgtgcattactacaatcctgc
acacatgatcttatgagtactgatggtgcaagtgaatattatttcaagatgtcaagtcgc
aggatgcgttgcaaagaggtacaggtgataccttgggtcctttcggatagcaactttgtc
cgtagcccatcccagcgcctggacccaagtaaaaccgtgtttgttggagcactgcatggg
atgttgaatgcagaagctttggcagcaatcatgaatgacttatttggtggagtagtatat
gctggtattgatactgacaagcacaagtatccaattggctctggtcgagtcacttttaac
aaccagcgcagttacctgaatgctgttggagcagcctttgtagagatcaagactccaaaa
ttcactaaaaaagtgcagattgatccctacctggaggactccatgtgccaggcatgcagt
gctcagccaggaccgttcttctgtagagatccagtttgcttcaaatatttctgtcgttca
tgctggcagtggcagcattcccttgaagttcttcgccaccaccgtccattgatgcgtaac
caaaagaaccgcgactccagctaa
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