Rhincodon typus (whale shark): 109919446
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Entry
109919446 CDS
T06055
Symbol
washc5
Name
(RefSeq) WASH complex subunit 5
KO
K18464
WASH complex subunit strumpellin
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109919446 (washc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109919446 (washc5)
Membrane trafficking [BR:
rtp04131
]
Protein recycling
Others
WASH complex
109919446 (washc5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Strumpellin
DUF3106
HTH_28
Motif
Other DBs
NCBI-GeneID:
109919446
NCBI-ProteinID:
XP_020375042
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All DBs
Position
4:44935685..44993945
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AA seq
1160 aa
AA seq
DB search
MVDFLAENNLCGQAILRIVSRGNAIIAELLRLSEFIPTVYRLRDKAEQQKYGDIICDFSY
FKGPEYYEGKLEAKPELQDLDEEFRENHIEILTRFYLAFESVHKYIVDLNRFLDDLNEGV
YIQQTLETVLLNEDGKQLLCEALYLYGVMLLVIDLKIEGEVRERMLVSYYRYSAARSSSD
SNLDDICKLVRSTGYSPVAGAKRPPNYPESYFQRVPISNTFISMVVGRLRSDDIYNQVLA
YPLPEHRSTALATQAAMLYVILYFEPSILHTQQAKMREIVDKYFPDNWVISIYMGITVNL
IEAWEPYKAAKTALNYTLEQLNIKEQANRYGMSVEKLRRQVQQFLKEGFLREEYVLDHIP
KLLNCLRDCNVTIRWLMLHTAETVYDPNNKRLRQIKDQVFVDSKYSPKMLFQLLLDSAQF
EFVLKEMFKQMLSEKQAKWESYQKEGSERMTELAEVFSGVKPLTRVEKNENLQAWFREIS
KQISSLNYEDSTAAGRKTVQLIQALEEVQEFHQLESNLQICQFLADTRKFLHQMIRTINI
KEEVLISMQIIGDLSYAWQLIDSYTTIMQEGIRVSPFMVTKLKATFLKLASALDLPLMRI
NQANSPDLLSVSQYYSGELVAYVRKVLQIIPESMFTSLAKIIKLQTHSIMEVPTRLDKDK
LKDYSQLGARYEVARLTHAISIFTEGILMMKTTLVGIIKVDPKQLLEDGIRKELVRRVAY
ALHKGLIFNPKAKTSELMPKLKEMAATMDGFYRSFEYIQDYVSIYGLKIWQEEVSRIINY
NVEQECNNFLRTKILDWQSMYQSTHIPIPKFQPVDESVTFIGRLCREILRITDPKVTCYI
DQINTWYDMKTHQEVTNKQLFSEIQNSLGTFGLNGLDRLLCFMIVKEIQIFLGMLHRNVL
RDKAVMDTIKPFQIHLNPVKGIVANSSKVYSAAVQKTQKIWASYQDSILKVGQMQILRQQ
IANELSYSCKFDSKHLAAALENLNQSLLADVEAHYQDPTLPYPKDDNTLLYEITAYMEAA
GIHNPLSKIYITTKRLPYFPVVNFLFLISQLPKVQYIKNQGMVCKKSTDPTDWPPLVVGL
VTLLKQFHSRYTEHFLALIGQFVRSIVEQCTTSQKIPEMPADAVAALMFLENYVYYTKLP
RKVVEAHVPSFIFDEFRTIL
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggtagacttcttggcagagaacaatctctgcgggcaggcaattctcaggatcgtgtcc
cgcggtaacgccatcatagcagaacttttgagactgtccgagtttatcccgaccgtttac
agactccgagacaaggccgaacagcagaagtatggagatatcatctgcgacttcagttac
ttcaagggtcctgagtactatgaaggcaagttggaagctaagccagaacttcaggatttg
gatgaagaatttcgtgaaaatcacattgaaatattgacgagattttaccttgcctttgaa
agtgttcacaaatacatagttgatctgaacagatttcttgacgatctaaatgaaggcgta
tacattcaacaaacccttgaaacagtacttttaaatgaagatggaaaacaactactctgt
gaagccttatacttgtacggagtaatgctgctggttattgacctcaagattgaaggagag
gttagagaaaggatgctggtttcctactacagatacagtgctgctcgttcttcttctgat
tccaatctggatgatatttgcaagctggtgcgcagcactgggtattcacctgtggcaggg
gcaaagaggcccccaaattatccagagagctactttcagagagtgccaattagcaacaca
ttcatctcaatggtggttggtcgactacgatcagatgatatttacaatcaggtgttggca
tatccactgccagaacaccgtagcacagcccttgctacacaagctgccatgctttatgtc
atcctctactttgaaccatccattcttcatacacaacaagccaagatgagagagatagtg
gataaatactttccagacaactgggtgatcagcatttacatggggatcacagtcaacctg
attgaggcctgggaaccttacaaagctgcaaagacagccctgaactatacattggagcaa
ctgaacattaaagagcaggcaaatcgatatggtatgagtgttgaaaagttacgtcggcag
gtgcagcagttcctgaaggaaggcttcttgagggaagaatatgtgttggatcacatccct
aaactattaaactgcctgcgtgattgtaatgtgacaattcgatggttgatgcttcacact
gcagaaactgtgtatgatccaaacaacaagcgcttgcgacagattaaggaccaggttttc
gttgactcaaaatacagtcccaaaatgctttttcagcttttgctggacagtgctcagttt
gagtttgttttgaaggagatgtttaagcaaatgctctcagaaaagcaagccaaatgggaa
agttatcagaaagagggctctgagagaatgactgaacttgctgaggtgttctctggagta
aagcctctcaccagagtggaaaaaaatgaaaatctacaagcctggtttagggagatttca
aagcaaatttcttccttgaattatgaagactccacagcagctgggaggaagacagttcag
ttaatccaggctttggaagaggtccaagagttccaccaacttgaatcgaatttacagatc
tgccagtttctggctgacactcggaaatttctccatcagatgattcgcaccataaacatt
aaagaagaggtcctcattagcatgcagattataggtgacttatcgtacgcctggcagctt
attgacagctacacaactattatgcaagaaggtattcgagtcagtcctttcatggtaacc
aaacttaaggcaacatttttaaagttggcgtcagcccttgatcttccactgatgagaatt
aatcaggccaatagccctgaccttctgagtgtgtcccagtattattctggagagctggtc
gcctatgttagaaaggttttgcagataattccggaaagtatgtttacatccttggcaaag
attatcaagctgcaaacacacagtattatggaagtgccaactcgattggacaaagacaag
ctgaaagactattcccagcttggtgcaagatatgaggttgcaagacttactcatgcaata
tcaattttcactgaaggcattctcatgatgaagactacccttgttggcatcatcaaggtg
gatcctaagcaattgctggaagatggcatccggaaggaattggtcagaagggttgcctat
gctcttcacaaagggctcatttttaacccaaaagctaagactagtgaactgatgcccaaa
ctgaaagagatggctgccacgatggatggattctaccgttcgtttgaatacatacaagat
tatgtcagcatttatgggctgaagatatggcaggaggaggtgtctcgtataatcaactac
aatgtggaacaagagtgtaataatttcttgaggacaaagattctagactggcagagcatg
taccagtccacccatattcccattcctaaattccaaccggtcgatgaatctgtgacattt
attggtcggctttgcagagaaattctaagaatcactgaccccaaagtgacctgctacatt
gaccagataaacacatggtatgacatgaagactcaccaggaagtgaccaataaacaactc
ttctctgaaatccagaattccttgggcacatttgggctgaatggtctggatagactgctc
tgcttcatgattgttaaagagatccagattttcctgggtatgcttcatagaaatgtgcta
cgggacaaggctgtaatggacacgattaaaccctttcagattcatttaaatccagtaaaa
ggcatcgtagcaaattcaagcaaagtatattctgctgcagtgcagaaaacccagaagatc
tgggcatcttaccaagattccattctaaaggtgggacagatgcaaatattaagacagcag
attgccaatgaactgagctattcatgcaagtttgactcaaaacaccttgcagcagcattg
gagaatctcaatcaatctctgttagctgatgttgaagcacactatcaggatccgacatta
ccataccctaaagatgataacacactactttatgaaatcacagcttacatggaggctgct
ggcattcacaaccctctgagtaagatctacattaccacaaagagactaccatactttcca
gtggtgaattttctgtttctgatttctcagttgccaaaagtgcaatacattaagaaccaa
ggcatggtgtgtaagaagtccacggatcccacagattggccacctctggtggtcggactt
gtcactctgctgaagcaattccactcgcgttacacagagcattttctggccttaattggc
cagtttgttcgctccattgtggagcaatgtactactagtcagaaaatcccagaaatgcct
gctgatgctgtggctgccttgatgttcttggagaattatgtttattacacaaaattaccc
agaaaggttgtggaagcacatgtccctagtttcatctttgatgagttcagaacaattcta
taa
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